Coregonus clupeaformis (lake whitefish): 123482140
Help
Entry
123482140 CDS
T08357
Name
(RefSeq) nestin-like isoform X1
KO
K07609
nestin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
123482140
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
123482140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
123482140
NCBI-ProteinID:
XP_045064602
LinkDB
All DBs
Position
28:17836449..17850734
Genome browser
AA seq
1973 aa
AA seq
DB search
MELHSIRHHHSHRTDNKLQMLNLNQRLETYLGRVKLLEEENKLLCQEIQALRGSGQGGRM
GLEDKLSLARQEVGEAWREKDRVELELGSLGEELQALGLQRQWEADAHGEVKKKLADSRK
EMEEERRAQIWLREKVSQLEKQIQFQIQTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQELGEEYSQMAVRAWHEAAMVFQGQVNSLEESLNQARTRLAQVGQEKIESQLKLQALE
NELASAQDRRQYLERSVAQQRDRQRQEIQNLQAHLEVLEMEKGALGDQIDTLLIESRGLL
QLKMSLGMEVATYRALLDNESLMGDFSSTNQLRSTYMSDGVPSSRGVKQSFKTQLATSHI
ISPISTIHGASPRSNVTMMSASPLWTQNRVTLNETPESCRKTEERHVDFGVGSNRQVSWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSRLGSDHKEQCMWDMEK
EEEDQNIVRTWVAEEKPVVESTMSHQAETSFSMPTVYSTHAQELYSPSVSYERAHSGCSA
NNDNDVRFEMFSEKEEPLLDLNESEERNLETARKDAEWVGNEGLESETASVLEQAFETFT
SSQAFEYGVGKSGYNKPIEFNQEDNMSYESAQASHGSEEAFHHVKRVEEDVINLTKEDDE
NDMSNKDEEQLEDELRPYGYGKDNWERLGGFNKDNDMTERIDEFNQEKIISYESAQASHW
SEEVFHHVERVEEGDIHFRKGDDENDMFNKREEQYALHPNGDVMDEWDRVEGYNEENGIR
ERTDDWKEGKDHMKAEEMRNNRETQPNRSDQEYIPSGREKLNQSEQKYINSNGEKLNKSE
QKHIPSGREKLNISDKEDDDEANYSQNTSVSWRAELEGNSYAQDNTLADTHPLIRYKSDE
TDTNTQASHMGESDSSDGEEDREVGQTATGTWGEGKSKQFDTMEDLYEEPEGDVIDQESN
MGSTHTEDMDASQTKEHATQENNEENAVDQLIQKAEEEQSYEELTEPGEYSIMCSDEDYN
EEIIDRLVEQELENLSISSYNEHFTGQMIESESVLSLQIESHTELSQTQDMLYSEEVEQI
HSERLNQTEQKHITSGSEKLNQSESGHITSGGEKPNQSEQEYITSGGEKLNIYEQEHIPS
NGEKMNKSEQEHIPSGGEKLNQSESEYIPSNREKINQSEPENIPLGGEKRNKSEQEHIPS
GGEKLNQSEQEHIPSNGEKMNQSEPEYIPSGGEKQNKSEQEHIPSNGEKLNQSEQENIPL
RGEKLNQSEQENIPLGREKLNQSEQEYIPSGGEKLNQSEQEHIPLGGEKLNLYEQEHIPS
GGEKLNKSEQEHIPSNGEKMNQSEPEYIPLGREKLNQSEQEYIPSGGEKRNQSEQQYIPS
GGEKLNQYEQDHIPSGGEKLNQSEQENIPLRGEKLNQSEQENIPLGGEKLNQSEQEYIPS
GGEKLNQSEQEHIPLGGEKLNIYEQEHIPSDEEKINQSEPEYIPSGGEKLNKSEQEHIPS
NGEKLNQSEQENIPLHGEKLNQSEQENVPLGREKLNQSEQEYIPSGGEKLNQSEQEHIHL
GGEKLNLYEQELIPSDKEKMNQSEQENVPLGREKLNQSEQEYIPSGGEKLNQSEQEHIPS
DEEKMNKSEQQYITSGGEKLNQYEQDNLPSGREKLNLYEQEHIPSDNKKMNQSEQEYIPS
GGEKLNQSEQEHIPSGGEKLNQSEQECISSEVMYSVHSTILMTPEHTSLRESSVEMSKAE
YLAQGKVFSRGLGTEVVPDKIGEDDQKLSMLTHADFTESHYIHSSLNSRLESQTNMNNSD
IEESNSIDDESPNASQYLQPVTKANLTADQKDLLDVAVSHYEDCNALIEHSLEEVTSNQA
SHECLQTDEWEVLECPNKHLESGDPFAGHKRDSERSSKTDSKGRDLHSFLSSGVHNNFWG
SNPETGAPYQPDEPYDHVTELPNQNLDLADNLSWVDLKNPQAANWQLEHKDGQ
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacagcatccgacaccaccacagccaccggaccgacaacaagctccagatg
ctgaacctcaaccaacgcctggagacctacctgggccgagtgaagctgctggaggaggag
aacaagctactatgccaggagatccaggccctgagaggcagcggccagggggggcggatg
ggcctggaggacaagctgagcctggccaggcaggaggtgggggaagcctggagggagaag
gaccgggtggagctagagctagggagcctgggtgaggagctccaagccctggggctgcag
agacagtgggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaggagggctcagatctggttaagagagaaggtgagccagctagag
aaacaaatccagttccagatacaaacccaccaggaagatgttgccggcttccaggctaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggcacccagctaccc
agcctccaggagctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtgaacagcctggaggagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaagattgagagccagctgaaacttcaggccctggag
aatgagctggcatcagcccaggataggaggcagtatctggagaggagtgtggcccaacag
agagacaggcagaggcaggagatacaaaacctgcaggcccatctggaggtgttggagatg
gagaagggggctctgggagatcagattgacactctcctgatagaaagtaggggtctgctg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaatgaa
agtctgatgggggatttctcttcaacaaatcagctaaggagtacctacatgtctgatgga
gtgcccagctctcgaggggttaagcaaagcttcaagacacagctggctaccagtcacatt
atcagtcctatctctaccatccatggagcaagcccacgatccaatgtaacaatgatgtcc
gcatcaccactctggactcaaaatcgggtaaccctcaacgaaacacctgagagttgtcga
aagacagaggaaaggcatgttgactttggcgtagggtccaaccggcaggtaagttggtca
acgccttaccccaaagtaccacaggacggaatttcagtcgaccacttcagaccccaagat
gtccatgaagaagtcaactatgctgaacctctctcacctcccactgaagaggcaggagct
gatgttgtatctaggcttggatctgaccataaggaacaatgcatgtgggatatggaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctgaagagaaaccagttgtggaa
tctaccatgagccaccaggctgagaccagcttcagtatgccaactgtgtacagcactcat
gctcaagagctctacagcccttcagtgagctatgagagagcacattctggttgctcagcg
aataacgataatgatgtacgttttgaaatgttttctgaaaaagaggaacctctactagat
ctgaatgaatcggaggaaagaaatcttgaaacagcaaggaaagatgctgaatgggtggga
aatgaaggcttggaatctgaaactgcatcagtgctagaacaagcatttgagaccttcaca
agcagtcaagcttttgagtatggggtggggaaaagtggttacaacaagccaatagagttc
aatcaagaggacaatatgtcatatgaatctgctcaagcatcccacggttcagaagaggcc
tttcaccatgttaaaagagtggaggaagatgttattaatctcacaaaagaggatgatgaa
aatgatatgtctaacaaagatgaggagcaattggaagatgaattgcgcccctatgggtat
ggtaaggataattgggaaagattgggagggttcaataaggataatgatatgacagaaaga
atcgatgagttcaaccaagagaagattatctcatatgaatctgctcaagcttctcactgg
tcagaagaggtatttcaccatgttgaaagagtggaggaaggtgatatacatttcagaaaa
ggggatgatgaaaatgatatgtttaataaacgtgaggaacaatatgcattgcaccccaat
ggggatgtaatggatgaatgggatagagtggaagggtacaatgaggagaatggaattaga
gaaagaacggatgattggaaagaaggaaaggatcacatgaaagcggaagagatgaggaat
aacagagaaacccaacccaatcggtctgatcaagagtatataccgtcaggcagagagaaa
ctgaatcagtctgagcaaaagtatataaattcaaacggagagaaactgaataaatccgag
caaaagcatataccttcaggcagagagaaactgaatatatctgacaaagaggatgatgat
gaggcaaactactctcaaaatacttctgtttcatggagggctgagctagaaggaaacagc
tacgctcaggacaacacactggccgacacacaccccctgatccgttacaagagcgacgag
acagataccaacacgcaggcttcacacatgggcgaaagtgactccagtgatggtgaagag
gacagggaggttggccagacagcaacaggcacctggggcgaaggcaagtccaaacagttt
gacaccatggaagatctgtatgaagagccagaaggggatgtcatagatcaggaaagtaac
atgggctccactcacacagaggacatggatgctagccaaacaaaggagcatgctacacag
gagaacaatgaggagaatgctgtagatcagttgattcagaaggcagaagaggagcaatcc
tatgaggaacttacagaacctggagagtactccattatgtgctctgatgaggactataat
gaagaaataattgatagattggtggagcaagagttagagaatttatctatatccagttac
aatgaacactttactgggcagatgattgagagcgagtcagtactgagtcttcaaattgag
tctcacactgaactttcccagacacaagacatgttatacagtgaggaggtagagcagata
cactcagagagactgaatcaaactgagcaaaagcatataacctcaggcagcgagaaactg
aatcaatctgagtcagggcatataacttcaggcggagagaaaccgaatcaatctgaacaa
gagtatataacttcaggcggagagaaactgaatatatatgagcaagaacacataccctca
aacggagagaaaatgaataaatctgagcaagagcatataccttcaggcggggagaaactg
aatcaatccgagtcagagtatataccttcaaacagagagaaaattaatcaatccgagcca
gagaatatacctttaggtggagagaaacggaataaatcagagcaagagcatataccttca
ggcggagagaaactgaatcaatctgagcaagagcatataccttcaaacggagagaaaatg
aatcaatctgagcccgagtatataccttcaggcggagagaaacagaataaatctgagcaa
gagcatataccttcaaatggagagaaactgaatcaatctgagcaagagaatataccttta
cgcggagagaaactgaatcaatccgagcaagagaatatccctttaggcagagagaaactg
aatcaatctgaacaagagtatataccctcaggcggagagaaactgaatcaatctgagcaa
gagcatatacctttaggtggagagaaactaaatctatatgagcaagaacatataccttca
ggcggagagaaattgaataaatctgagcaagagcatataccttcaaacggagagaaaatg
aatcaatccgagccagagtatatacctttaggaagagagaaactgaatcaatctgaacaa
gagtatataccctcaggtggagagaaacggaatcaatctgaacagcagtacataccttca
ggcggagagaaactgaatcagtatgagcaagaccatataccttcaggtggagagaaactg
aatcaatccgagcaagagaatatacctttacgtggagagaaactgaatcaatccgagcaa
gagaatatcccattaggcggagagaaactgaatcaatctgaacaagagtatataccctca
ggtggagagaaactgaatcaatctgagcaagagcatatacctttaggtggagagaaacta
aatatatatgagcaagaacacataccctcagacgaagagaaaattaatcaatccgagcct
gagtatataccttcaggcggagagaaactgaataaatctgagcaagagcatataccttca
aatggagagaaactgaatcaatccgagcaagagaatatacctttacacggagagaaactg
aatcaatccgagcaagagaatgtccctttaggcagagagaaactgaatcaatctgaacaa
gagtatataccctcaggcggagagaaactgaatcaatctgagcaagagcatatacattta
ggtggagagaaactaaatctatatgagcaagaactcataccctcagacaaagagaaaatg
aatcaatctgagcaagagaatgtccctttaggcagagagaaactgaatcaatctgaacaa
gagtatataccctcaggcggagagaaactgaatcaatctgagcaagaacacataccctca
gatgaagagaaaatgaataaatctgaacagcagtacataacttcaggcggagagaaactg
aatcagtatgagcaagataatttaccttcaggcagagagaaactgaatctatatgagcaa
gaacatataccctcagacaacaagaaaatgaatcaatctgagcaagagtatataccttca
ggcggagagaaactgaatcagtctgagcaagagcatataccttcaggtggagagaaactg
aatcagtctgagcaagagtgtatttcctcagaggttatgtattcggtgcactctacgatt
ctaatgacacctgaacacacatctcttagagaaagttcagtagaaatgtccaaagcagaa
tatttggctcaaggtaaggtcttcagtaggggactgggaactgaagttgtaccagacaaa
ataggagaggatgaccagaagctttctatgctgactcatgcagacttcactgaaagccat
tatatccacagcagtttaaatagcaggcttgagagtcaaaccaacatgaacaactcggat
atagaagagtccaacagcatagatgatgagtcgccaaatgcaagccagtatttgcaacct
gtcaccaaagcaaatctaactgcagatcagaaagacttgttagatgtggcggtctctcac
tatgaggattgcaatgctcttatagaacattctttagaggaggtcactagcaatcaggca
agccatgaatgtcttcagacagacgaatgggaagtcttagaatgtccaaacaaacaccta
gaatctggagatccttttgcaggtcacaagagagactcagagagatcatccaaaactgac
agcaaaggccgggacctccacagcttcctcagctctggtgtacacaacaacttctggggt
tccaatccggagacaggagccccctatcaaccggatgagccatatgaccatgtgaccgag
ctacccaatcagaacctagacttggctgacaacctatcctgggtggatttgaagaatcca
caggcggccaattggcaattggaacacaaagatggacagtga
DBGET
integrated database retrieval system