KEGG   Coregonus clupeaformis (lake whitefish): 123482140
Entry
123482140         CDS       T08357                                 
Name
(RefSeq) nestin-like isoform X1
  KO
K07609  nestin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    123482140
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     123482140
SSDB
Motif
Pfam: Filament
Other DBs
NCBI-GeneID: 123482140
NCBI-ProteinID: XP_045064602
LinkDB
Position
28:17836449..17850734
AA seq 1973 aa
MELHSIRHHHSHRTDNKLQMLNLNQRLETYLGRVKLLEEENKLLCQEIQALRGSGQGGRM
GLEDKLSLARQEVGEAWREKDRVELELGSLGEELQALGLQRQWEADAHGEVKKKLADSRK
EMEEERRAQIWLREKVSQLEKQIQFQIQTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQELGEEYSQMAVRAWHEAAMVFQGQVNSLEESLNQARTRLAQVGQEKIESQLKLQALE
NELASAQDRRQYLERSVAQQRDRQRQEIQNLQAHLEVLEMEKGALGDQIDTLLIESRGLL
QLKMSLGMEVATYRALLDNESLMGDFSSTNQLRSTYMSDGVPSSRGVKQSFKTQLATSHI
ISPISTIHGASPRSNVTMMSASPLWTQNRVTLNETPESCRKTEERHVDFGVGSNRQVSWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSRLGSDHKEQCMWDMEK
EEEDQNIVRTWVAEEKPVVESTMSHQAETSFSMPTVYSTHAQELYSPSVSYERAHSGCSA
NNDNDVRFEMFSEKEEPLLDLNESEERNLETARKDAEWVGNEGLESETASVLEQAFETFT
SSQAFEYGVGKSGYNKPIEFNQEDNMSYESAQASHGSEEAFHHVKRVEEDVINLTKEDDE
NDMSNKDEEQLEDELRPYGYGKDNWERLGGFNKDNDMTERIDEFNQEKIISYESAQASHW
SEEVFHHVERVEEGDIHFRKGDDENDMFNKREEQYALHPNGDVMDEWDRVEGYNEENGIR
ERTDDWKEGKDHMKAEEMRNNRETQPNRSDQEYIPSGREKLNQSEQKYINSNGEKLNKSE
QKHIPSGREKLNISDKEDDDEANYSQNTSVSWRAELEGNSYAQDNTLADTHPLIRYKSDE
TDTNTQASHMGESDSSDGEEDREVGQTATGTWGEGKSKQFDTMEDLYEEPEGDVIDQESN
MGSTHTEDMDASQTKEHATQENNEENAVDQLIQKAEEEQSYEELTEPGEYSIMCSDEDYN
EEIIDRLVEQELENLSISSYNEHFTGQMIESESVLSLQIESHTELSQTQDMLYSEEVEQI
HSERLNQTEQKHITSGSEKLNQSESGHITSGGEKPNQSEQEYITSGGEKLNIYEQEHIPS
NGEKMNKSEQEHIPSGGEKLNQSESEYIPSNREKINQSEPENIPLGGEKRNKSEQEHIPS
GGEKLNQSEQEHIPSNGEKMNQSEPEYIPSGGEKQNKSEQEHIPSNGEKLNQSEQENIPL
RGEKLNQSEQENIPLGREKLNQSEQEYIPSGGEKLNQSEQEHIPLGGEKLNLYEQEHIPS
GGEKLNKSEQEHIPSNGEKMNQSEPEYIPLGREKLNQSEQEYIPSGGEKRNQSEQQYIPS
GGEKLNQYEQDHIPSGGEKLNQSEQENIPLRGEKLNQSEQENIPLGGEKLNQSEQEYIPS
GGEKLNQSEQEHIPLGGEKLNIYEQEHIPSDEEKINQSEPEYIPSGGEKLNKSEQEHIPS
NGEKLNQSEQENIPLHGEKLNQSEQENVPLGREKLNQSEQEYIPSGGEKLNQSEQEHIHL
GGEKLNLYEQELIPSDKEKMNQSEQENVPLGREKLNQSEQEYIPSGGEKLNQSEQEHIPS
DEEKMNKSEQQYITSGGEKLNQYEQDNLPSGREKLNLYEQEHIPSDNKKMNQSEQEYIPS
GGEKLNQSEQEHIPSGGEKLNQSEQECISSEVMYSVHSTILMTPEHTSLRESSVEMSKAE
YLAQGKVFSRGLGTEVVPDKIGEDDQKLSMLTHADFTESHYIHSSLNSRLESQTNMNNSD
IEESNSIDDESPNASQYLQPVTKANLTADQKDLLDVAVSHYEDCNALIEHSLEEVTSNQA
SHECLQTDEWEVLECPNKHLESGDPFAGHKRDSERSSKTDSKGRDLHSFLSSGVHNNFWG
SNPETGAPYQPDEPYDHVTELPNQNLDLADNLSWVDLKNPQAANWQLEHKDGQ
NT seq 5922 nt   +upstreamnt  +downstreamnt
atggagctccacagcatccgacaccaccacagccaccggaccgacaacaagctccagatg
ctgaacctcaaccaacgcctggagacctacctgggccgagtgaagctgctggaggaggag
aacaagctactatgccaggagatccaggccctgagaggcagcggccagggggggcggatg
ggcctggaggacaagctgagcctggccaggcaggaggtgggggaagcctggagggagaag
gaccgggtggagctagagctagggagcctgggtgaggagctccaagccctggggctgcag
agacagtgggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaggagggctcagatctggttaagagagaaggtgagccagctagag
aaacaaatccagttccagatacaaacccaccaggaagatgttgccggcttccaggctaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggcacccagctaccc
agcctccaggagctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtgaacagcctggaggagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaagattgagagccagctgaaacttcaggccctggag
aatgagctggcatcagcccaggataggaggcagtatctggagaggagtgtggcccaacag
agagacaggcagaggcaggagatacaaaacctgcaggcccatctggaggtgttggagatg
gagaagggggctctgggagatcagattgacactctcctgatagaaagtaggggtctgctg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaatgaa
agtctgatgggggatttctcttcaacaaatcagctaaggagtacctacatgtctgatgga
gtgcccagctctcgaggggttaagcaaagcttcaagacacagctggctaccagtcacatt
atcagtcctatctctaccatccatggagcaagcccacgatccaatgtaacaatgatgtcc
gcatcaccactctggactcaaaatcgggtaaccctcaacgaaacacctgagagttgtcga
aagacagaggaaaggcatgttgactttggcgtagggtccaaccggcaggtaagttggtca
acgccttaccccaaagtaccacaggacggaatttcagtcgaccacttcagaccccaagat
gtccatgaagaagtcaactatgctgaacctctctcacctcccactgaagaggcaggagct
gatgttgtatctaggcttggatctgaccataaggaacaatgcatgtgggatatggaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctgaagagaaaccagttgtggaa
tctaccatgagccaccaggctgagaccagcttcagtatgccaactgtgtacagcactcat
gctcaagagctctacagcccttcagtgagctatgagagagcacattctggttgctcagcg
aataacgataatgatgtacgttttgaaatgttttctgaaaaagaggaacctctactagat
ctgaatgaatcggaggaaagaaatcttgaaacagcaaggaaagatgctgaatgggtggga
aatgaaggcttggaatctgaaactgcatcagtgctagaacaagcatttgagaccttcaca
agcagtcaagcttttgagtatggggtggggaaaagtggttacaacaagccaatagagttc
aatcaagaggacaatatgtcatatgaatctgctcaagcatcccacggttcagaagaggcc
tttcaccatgttaaaagagtggaggaagatgttattaatctcacaaaagaggatgatgaa
aatgatatgtctaacaaagatgaggagcaattggaagatgaattgcgcccctatgggtat
ggtaaggataattgggaaagattgggagggttcaataaggataatgatatgacagaaaga
atcgatgagttcaaccaagagaagattatctcatatgaatctgctcaagcttctcactgg
tcagaagaggtatttcaccatgttgaaagagtggaggaaggtgatatacatttcagaaaa
ggggatgatgaaaatgatatgtttaataaacgtgaggaacaatatgcattgcaccccaat
ggggatgtaatggatgaatgggatagagtggaagggtacaatgaggagaatggaattaga
gaaagaacggatgattggaaagaaggaaaggatcacatgaaagcggaagagatgaggaat
aacagagaaacccaacccaatcggtctgatcaagagtatataccgtcaggcagagagaaa
ctgaatcagtctgagcaaaagtatataaattcaaacggagagaaactgaataaatccgag
caaaagcatataccttcaggcagagagaaactgaatatatctgacaaagaggatgatgat
gaggcaaactactctcaaaatacttctgtttcatggagggctgagctagaaggaaacagc
tacgctcaggacaacacactggccgacacacaccccctgatccgttacaagagcgacgag
acagataccaacacgcaggcttcacacatgggcgaaagtgactccagtgatggtgaagag
gacagggaggttggccagacagcaacaggcacctggggcgaaggcaagtccaaacagttt
gacaccatggaagatctgtatgaagagccagaaggggatgtcatagatcaggaaagtaac
atgggctccactcacacagaggacatggatgctagccaaacaaaggagcatgctacacag
gagaacaatgaggagaatgctgtagatcagttgattcagaaggcagaagaggagcaatcc
tatgaggaacttacagaacctggagagtactccattatgtgctctgatgaggactataat
gaagaaataattgatagattggtggagcaagagttagagaatttatctatatccagttac
aatgaacactttactgggcagatgattgagagcgagtcagtactgagtcttcaaattgag
tctcacactgaactttcccagacacaagacatgttatacagtgaggaggtagagcagata
cactcagagagactgaatcaaactgagcaaaagcatataacctcaggcagcgagaaactg
aatcaatctgagtcagggcatataacttcaggcggagagaaaccgaatcaatctgaacaa
gagtatataacttcaggcggagagaaactgaatatatatgagcaagaacacataccctca
aacggagagaaaatgaataaatctgagcaagagcatataccttcaggcggggagaaactg
aatcaatccgagtcagagtatataccttcaaacagagagaaaattaatcaatccgagcca
gagaatatacctttaggtggagagaaacggaataaatcagagcaagagcatataccttca
ggcggagagaaactgaatcaatctgagcaagagcatataccttcaaacggagagaaaatg
aatcaatctgagcccgagtatataccttcaggcggagagaaacagaataaatctgagcaa
gagcatataccttcaaatggagagaaactgaatcaatctgagcaagagaatataccttta
cgcggagagaaactgaatcaatccgagcaagagaatatccctttaggcagagagaaactg
aatcaatctgaacaagagtatataccctcaggcggagagaaactgaatcaatctgagcaa
gagcatatacctttaggtggagagaaactaaatctatatgagcaagaacatataccttca
ggcggagagaaattgaataaatctgagcaagagcatataccttcaaacggagagaaaatg
aatcaatccgagccagagtatatacctttaggaagagagaaactgaatcaatctgaacaa
gagtatataccctcaggtggagagaaacggaatcaatctgaacagcagtacataccttca
ggcggagagaaactgaatcagtatgagcaagaccatataccttcaggtggagagaaactg
aatcaatccgagcaagagaatatacctttacgtggagagaaactgaatcaatccgagcaa
gagaatatcccattaggcggagagaaactgaatcaatctgaacaagagtatataccctca
ggtggagagaaactgaatcaatctgagcaagagcatatacctttaggtggagagaaacta
aatatatatgagcaagaacacataccctcagacgaagagaaaattaatcaatccgagcct
gagtatataccttcaggcggagagaaactgaataaatctgagcaagagcatataccttca
aatggagagaaactgaatcaatccgagcaagagaatatacctttacacggagagaaactg
aatcaatccgagcaagagaatgtccctttaggcagagagaaactgaatcaatctgaacaa
gagtatataccctcaggcggagagaaactgaatcaatctgagcaagagcatatacattta
ggtggagagaaactaaatctatatgagcaagaactcataccctcagacaaagagaaaatg
aatcaatctgagcaagagaatgtccctttaggcagagagaaactgaatcaatctgaacaa
gagtatataccctcaggcggagagaaactgaatcaatctgagcaagaacacataccctca
gatgaagagaaaatgaataaatctgaacagcagtacataacttcaggcggagagaaactg
aatcagtatgagcaagataatttaccttcaggcagagagaaactgaatctatatgagcaa
gaacatataccctcagacaacaagaaaatgaatcaatctgagcaagagtatataccttca
ggcggagagaaactgaatcagtctgagcaagagcatataccttcaggtggagagaaactg
aatcagtctgagcaagagtgtatttcctcagaggttatgtattcggtgcactctacgatt
ctaatgacacctgaacacacatctcttagagaaagttcagtagaaatgtccaaagcagaa
tatttggctcaaggtaaggtcttcagtaggggactgggaactgaagttgtaccagacaaa
ataggagaggatgaccagaagctttctatgctgactcatgcagacttcactgaaagccat
tatatccacagcagtttaaatagcaggcttgagagtcaaaccaacatgaacaactcggat
atagaagagtccaacagcatagatgatgagtcgccaaatgcaagccagtatttgcaacct
gtcaccaaagcaaatctaactgcagatcagaaagacttgttagatgtggcggtctctcac
tatgaggattgcaatgctcttatagaacattctttagaggaggtcactagcaatcaggca
agccatgaatgtcttcagacagacgaatgggaagtcttagaatgtccaaacaaacaccta
gaatctggagatccttttgcaggtcacaagagagactcagagagatcatccaaaactgac
agcaaaggccgggacctccacagcttcctcagctctggtgtacacaacaacttctggggt
tccaatccggagacaggagccccctatcaaccggatgagccatatgaccatgtgaccgag
ctacccaatcagaacctagacttggctgacaacctatcctgggtggatttgaagaatcca
caggcggccaattggcaattggaacacaaagatggacagtga

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