Coregonus clupeaformis (lake whitefish): 123482233
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Entry
123482233 CDS
T08357
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
123482233 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123482233 (usp43a)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123482233 (usp43a)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123482233 (usp43a)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123482233 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
123482233
NCBI-ProteinID:
XP_045065194
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All DBs
Position
29:complement(61279365..61394785)
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AA seq
1254 aa
AA seq
DB search
MDNHKENKMRKQSMKTKSTKRKEKKYKAGKVFRRKSLKSVGHFMSRILKTLGTLAHFGDV
ETPDGEDDDGGFRNSAACSSSANSGNFNKDEFLVSREIKVKKSASTLSSHGSIKDRLSWC
YGDKTPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDLCQGRVNGIVKNEDA
QLARGEVTTQLASLVRALWTLEYTPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDR
VHEDANPTTNNNHSSNSSSKTKANGKGPMGGGEESPVSGPAAEHQPGTRHSFVQDHFQAQ
YRSSLTCPHCLKQSNTFDPFLCISLPIPLRQTRCMSVILVLSTKGQRYLRVGLAVPLIGS
ISCLRAMVAEEGKITPDQVILLELYATGFQRSFSDDDDLTSVAESDVVYAFQAPPLHTRG
GSTRISGYHHSLPSSPYTSGPEGQRLPPSTTLSSEFLNHSGSTKVLLVICNIAGSGQQAV
RFGPPFLMREERTLSWDQLQQSILSKLYYLMLNGSQAQNAGLLFKIRVVGGSASYSYLSP
QDGRPLFHPAVDRALKLCGPGGPPHVKLEIEWEHKIKECLFGNIQEEVVKVSESVRVQQQ
QHLQQHSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRF
RQVGERRNKLSTQVRFPLAGLDMDPHVVKRSQSMRNLGNLGPWPPTWKQPGGSSHHISHP
DMALPPDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGA
YILFYQRRNVIPPWSASSSIRGSTSSSMSDHWLVRLNGDSKRGSLVSRSSTTCPSSVPDS
PESPVFLDDPPREEKGGFESRPLVRGIQGRSVSMRTPTKNRETLNKVLPLRWSFGSKDRR
KTAAEPAPAPIPTLAPVELVEYLESGRRPRCTKDSIVNLMTGSESQQGSAISSPSVGSSL
NCMGQPESPQMPEGQRRPVTDKTGSLRRSSKGSQQQQRDQRDEGRMGSGSSTNTLTRRST
KKSKEKDQGKLQEAQSRRGSSAGFQPSSSTHSLRDRDWEGTLRRGAKGNQDPPPGDRLVP
PEGEKTRKGEKVEEASKSHEGLLSFFKSNFKKKDKESSSSRKSDSGKVGDVGGSSTSRLS
LSSGAPGGATKTGEAKPNGAPRNGGANCLGDELPNGKARRAADIKRSQSSSNIPSKEESS
MRRTASLHRNGLSHGVAPPPRSLTAEKPSYGTLQKTRYSTTSLGRKRTVPESSF
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggataaccacaaggagaataagatgaggaaacagtccatgaaaaccaaatcgacaaaa
cgcaaagagaagaaatacaaagccgggaaggttttcagaaggaaatcgttgaagtccgtt
gggcatttcatgagcaggatactgaaaactttgggaactttggcacactttggcgacgtc
gagacacctgacggcgaggatgatgatggcgggttccgaaacagcgccgcgtgctcgtcg
agtgccaactcagggaattttaataaagatgaatttctggtctcgagggagattaaggtg
aagaaaagcgcctcaactttgtcttctcatggatctataaaagacaggctgtcgtggtgc
tatggcgacaaaactcctggagtccttggtttgaagaatcatggaaacacttgtttcatg
aatgcggtggttcagtgcctcagtaatacggaccttctggcggagtaccttggtttggaa
caatacaagtctgatttgtgtcaggggagagtaaacggaattgtaaaaaacgaggacgca
caacttgccaggggtgaggtgaccacacagttggcatccttggtgcgggcgctttggacc
ctcgaatatacccctcaactgtccgtggaattcaagagtattgtgtccaaatacggctct
cagttcagggggaactctcagcacgatgccctggagttcctgctctggctcttggaccgg
gtccatgaggatgccaaccccaccaccaacaacaaccacagcagcaatagcagcagcaag
accaaagccaacggaaagggcccgatgggtggaggggaggagagccctgtctccggccca
gcagcagaacaccagcctgggacgcggcacagcttcgtccaggaccactttcaggcacag
tacaggtcctccctgacatgtccacattgccttaaacagagcaacacctttgaccccttc
ctctgcatctcactgcccattcccctacggcaaaccaggtgtatgagtgtgatcctggtg
cttagtactaagggtcagaggtatctacgtgttggtctggctgtgcctctcattggctcc
atctcctgcctgcgtgccatggtggctgaggagggcaagatcacgccagaccaggtgatc
ctgttagagctctacgccaccggcttccagcgttcgttctctgacgacgacgatctgacc
agcgttgccgagagcgatgtggtctatgccttccaggctccgcccctccacacacgggga
ggctccacgcgaatctcgggctaccaccacagcctcccatcctctccgtacacctctggg
ccagagggtcaaaggttacccccatcgaccactctgtcctcagagttcctgaaccacagt
ggttccaccaaggtcctcctcgtcatctgcaacatagcaggctctggccagcaggccgtc
aggttcggccctcccttcctcatgagagaggagcgtaccctgtcctgggaccagctccag
cagagtatcctcagcaagctctactacctgatgctgaacggatcacaggctcagaatgca
gggttgctgttcaagatcagagtggtgggaggatctgcctcctacagctacctgtcccca
caagatggacgccctctcttccaccctgccgtggacagagccctgaagttatgtggcccg
ggaggaccaccccatgtgaagctggagattgagtgggaacacaagatcaaagaatgtctg
tttggtaacatccaggaggaggtggtgaaggtctcagagagtgtgagagtccagcagcag
cagcacctgcagcagcacagctgtaccctggacgagtgctttcagctctacaccaaagag
gaacagctggccccagacgacgcatggaagtgtccccactgtaagcagctccagcagggc
atggtgaagatgtccctgtggaccctccccgacatcctcatcctccacctcaaacgcttc
cgtcaggtgggtgagcggcgcaacaagctgtccacccaggtgcgcttccccctggccggg
ttggacatggacccccacgtggtgaagaggtcccagagcatgaggaacctggggaacctg
ggaccctggccccccacatggaaacagcctggaggcagcagtcatcatattagtcaccca
gacatggccctgcctcctgacttcctctatgacctctatgcagtgtgtaaccaccatggt
gggatgcacggcggacattacacagcatactgcaggaactcagtggacggccagtggtac
agctatgatgacagcagtgtggacctggtgcctgaggaggaggtgtgtaccagaggggcc
tacatactgttctaccagagacgtaacgtcatccccccctggtccgccagcagctcaatc
agaggctccaccagctcctccatgtcggaccactggctggtccgtctgaatggggacagt
aagaggggtagtctggtgtcccgctcctccaccacctgcccctcctctgtccccgactcc
ccagagtcccccgtcttccttgatgacccccccagagaggagaaaggtggttttgagagc
aggccgttggtacggggcatccagggtcgtagcgtaagcatgaggacccccactaagaac
agagagacactgaacaaggtcctcccgctacgctggtcgttcggctccaaggaccgccga
aaaactgcagccgagcccgcccctgctcccatccccacccttgcccctgtggaactggtg
gagtacctagagtctggaagaagacctcgctgcaccaaggactctatagtcaatttaatg
acgggctctgagagccagcagggatctgccatcagctcccccagtgtgggaagcagcctg
aactgcatgggacaaccagagtctccgcagatgccagagggccagagaagaccagtcaca
gacaagacagggagtctgagacgaagtagcaaagggtcccagcagcagcagagagaccag
agggacgagggtaggatgggcagtggtagtagtactaacactctgaccaggaggagtacc
aagaagagtaaggagaaagaccagggaaagctccaggaggcccagtctaggagggggtct
agtgcaggcttccagcccagctccagcacccacagcctcagggacagagactgggaaggc
accctgaggaggggtgccaagggcaaccaggacccaccaccaggggaccgccttgtacca
cccgagggagaaaagaccaggaagggtgagaaggtagaggaggcctccaagagccacgag
gggctgctgtctttcttcaagagcaacttcaagaagaaggacaaggagtcgtcatcttct
cgcaagtccgactctggaaaagttggcgacgtcggcgggtccagcacctcccggctgtcc
ctgtccagtggagccccaggcggggccacgaagacgggggaggcgaaacccaacggagcc
ccccgcaacgggggtgccaattgtctcggagacgagctgcccaacggtaaagccagacgc
gccgccgatatcaaacgctcccagagctcgtccaacatccccagcaaggaagagtctagc
atgcgaaggactgcctctttacaccgtaacgggctgtcacatggcgtggctccgccccct
cgcagcctcacagccgagaagccctcctacggtaccctgcagaagactcgctatagtacc
acctcactgggacgcaagaggacggtccccgagtccagcttttag
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