Coregonus clupeaformis (lake whitefish): 123482290
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Entry
123482290 CDS
T08357
Symbol
egr1
Name
(RefSeq) early growth response protein 1
KO
K09203
early growth response protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
123482290 (egr1)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
123482290 (egr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123482290 (egr1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
123482290 (egr1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3432
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HC_2
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-BED
Zf-C2H2_ZNF451_1st
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
123482290
NCBI-ProteinID:
XP_045065351
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Position
3:31984847..31989129
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AA seq
512 aa
AA seq
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MAATKTEMLNPALQISDALSFTHSHMDNYPKLEDMMMLSSAGTPFLSASAPEGADFGSGE
PGEQYDHLTGDTLPDISMNCEKSMGEQSYSTQRLPPISYTGRFTMEPATNSSNSLWAEPL
FSLVSGLVAINPPSTSTPSSSASQTGTSSSLSSSISSIAISSQSSGLSCSVHHSENNPIY
SAAPTYSSASPDIFSDQGQCFPSPAGGSLQYNPPAYPNGKMCGNSFPVPMIPDYLFPQQQ
GEISLLPDQKPFQNGSGQPSLTPLSTIKAFATQTGSQDPKRVYQSQVIKPSRMRKYPNRP
SKTPPHERPYACPVETCDRRFTRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR
THTGEKPFACEICGRKFARSDERKRHTKIHMRQKDKKAENGGMTGLLAVAAASASAPSPA
SSYASPITSYPSPVSSYPSPVTSCYSSPIHTSYPSPSIATTYPSVSMSMSTTFQSSMASS
FPSSVASIYTSPVPTPLSDMQSTLSPRTIEIC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaccaagacagagatgctcaatccagccctgcagatctcagacgccctcagc
ttcacccactcgcacatggataactatcccaagctggaggatatgatgatgttgagctcc
gctgggacccccttcctctctgcctcagcacccgagggagcagatttcggatcgggggag
ccaggagagcagtatgaccaccttactggagatacgttacctgatatctccatgaactgt
gagaagtcgatgggcgagcagagctactccacccagcggctgcctcccatctcctacacc
ggccgcttcaccatggagcccgccaccaacagcagcaacagcctgtgggccgagcccctg
ttcagtctggtcagtgggctggttgcgatcaaccccccctccacctccaccccatcctcc
tccgcctctcagaccggcacctcttcctcgttgtcctcctctatctcatccatcgccatc
tcctctcagagctccggtctgagctgctccgtccaccacagtgagaataaccccatctac
tcggctgctcctacctactccagcgccagccctgacatattttccgatcagggccagtgc
ttccccagccccgccggagggtcgctccagtacaaccctccagcctaccctaacgggaag
atgtgtggcaacagcttccctgtgcccatgatccctgactacctcttcccccagcagcag
ggggagattagccttctacctgatcagaagcccttccagaacgggtcaggccagccctcc
ctcacccccctgtccaccataaaagccttcgccacccagacaggctcccaagacccgaag
cgtgtctaccagtcccaggtgatcaagcccagccgcatgcgcaagtaccccaaccggccc
agcaagacgccgccccacgagaggccgtatgcctgccccgtggagacatgcgaccgccgt
ttcacccgctcagacgagttgacacgccacatccgcatccacacaggccagaagcccttc
cagtgccgtatctgcatgcgcaacttcagccgcagcgaccacctgaccacgcacatacgc
acgcacaccggtgagaagcccttcgcctgcgagatctgtggacgcaagtttgcccgcagc
gacgagaggaagaggcacaccaagatccacatgaggcagaaggacaagaaggcggaaaac
ggtgggatgactgggttgttggctgtagcagcagcttcagcatcagccccttcccctgcc
tctagttacgcctctcccatcacctcctacccctccccggtctcctcctacccctcccca
gtcacatcctgctactcctctcccatccacacctcgtacccctctccctccatcgccacc
acctacccctctgtctccatgtccatgtccactacctttcagtcctccatggcatcctcc
ttcccctcctccgtagcctccatctacacctctccggtccccaccccgctatcagacatg
cagtccacactctccccaaggacaatcgagatctgctaa
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