Coregonus clupeaformis (lake whitefish): 123482410
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Entry
123482410 CDS
T08357
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1-like
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
123482410
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123482410
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: TKL group
LRRK family
123482410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
COR-B
LRR_4
Ank_2
Roc
Ank
LRR_14
COR-A
Ank_3
Ank_4
Ras
LRR_9
Ank_KRIT1
Gtr1_RagA
Arf
Motif
Other DBs
NCBI-GeneID:
123482410
NCBI-ProteinID:
XP_045065895
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All DBs
Position
32:6777715..6836226
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AA seq
1700 aa
AA seq
DB search
MGELRLLCVATQHGDAESVSYLLHEARVPLPLEPSEGNPAVLAAHYGHVSLVRELLDSVP
GPCVHRDLLNWMLVSACQQGHLEVVRMLVQGYHADAEDCAIHNEEFAVITGLPLYAAARA
GNEDIASFLLQNGAGFSSYTLMDYPAFSRLLLEQRLLLCGRWSGLKLPWLELDWFMDVSS
RISHLDLSCNSLSTLPSVVPWGLIQLQTLDLSNNLFKELPTAQSSQEIICSRLRQVNLSQ
NELTSLPSGLLHLTRVQKLSAVKNKLTSLFDIPNGTNWIGLRKLEELDVSDNCLTSLPSA
VLHSFKSLTSLKVCRNRLTSFPDPWACPLKHCRASSNAIESLPNTISIFWRTQLQEVDFS
DNVIKELPSYIFELEALVSLRLCKNQISTLPAPNKWKCSLLRTLDLSRNQLGNNPGIREL
PAELGQLSNLWQLDIEDLNITNVPQDIRKEGPASVLSFLRAHLRKAEPCKLLKLLVIGPP
RQGKDGPPGGVTDGQDLPFSPAERNISTATWELDRPNGVKASTDSVAFNVWDIGGPANMS
TVNQCFFTDKALYVVIWNLALGEEAVANLQSWLLNIEARAPNSAVVVVGTHLDLIDTKFR
TERVATLRAYILALSRSPSGARASGYPDITWKHLHEVSCKTQEGLDGLRRLIFQVACYMK
DNSSSSASGHKLVGRLIPKSYLTLQQAVLGERGRRDAEDEVQYLTDAQLDLVIEQNPGSD
IRDYEDLQTAISFLIETGTLLHFPDTSHGLCTLYFLCPVWLSECLERIIHLKSSRSTEEQ
YFQFLAKFEIALPVASDSYLLPHLLPPKPAMDIHGFRQETANTIQRLFKMSFVPAGFWER
FIARMLISLTEMDLQSFEPKKNAKSERRRTTVIYNFAGTGSQQRNRCSTFRVRRSKTIYW
REGLLVTFDGGYLSVESTDVNWKRKKSGGIKIICQSETRDFSAMAFVTDHVNSLIEQWFP
ALTASESDGTRLIEQYSPCPQCSSMSRQNQGPGSLGEPPTKGTAAGRRGGEGREKVGGRG
EHFFNMEDCVIAAMDQDYIVCPQHPDQPVPLQELVPELFMTDFPSRLFLEKAQLECSEEE
SDILGQGGSGAVIYRACYRGQPVAIKRFHFKKCRQQTISSDTDTMMKHFQSMDACRSFSE
FRQEASMLHSLQHPCIVALVGISIHPLCFALQLAPLGSLNTVLEDRHKGSRYMPLGHMLT
FRAAYQIAAGLAYLHRKNIIFCDLKSDNILVWSLEVCDLVNIKLSDYGISRQSFHEGALG
VEGTPGYQAPEIRPGIVYDEKVDMFSYGMVVYELLSGCRPALGQHQLQIAKKLSKGIRPA
LGSPEEVQFHCLHGLMIECWDTKPEKLFLSHLQGHSAVFWDGDKDDRSREVSIYSLKEMC
PLSQPQKQLSCPAIVTCLFPVPARDQRPGNSPVVTCLFPVPARDQRPGNSPVVTCLFPVP
ARDQRPGNSPVVTCLFLVPARDQRPGNSPVVTCLFPRARQRPGNSPVVTCLFPVPARDQT
QARVFMGMSDGLVAVYSLVDDMPVEGETYLCSHTLNTTMFGMEDSDPRQRPYPLWYSHGP
GLLVINCRTPPGGVVWTPYDPPSSIQALASSLCLSGDEAVGTLDDHTNTLQLYHAATYQL
CATYRCVRPVATPTPPGRVHCTATCRGYHGYDPDLDSKRKGLEEEEEECPNGEVTLIYSA
EAGTQIIQHQDSRRTTAPVL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgggagagctgcgtctcctgtgtgtggccacccagcatggtgatgcggagagtgtaagt
tacctcctccatgaggcccgtgtgcccctgcccctggagccatcggagggaaaccccgcc
gtccttgctgcccactatggacatgtcagcctggtcagagagctgctcgactcagtacca
ggtccgtgtgtccacagagatctgctgaactggatgttggtgtcggcgtgccaacagggt
cacctggaggtggttagaatgttggtgcagggttaccatgctgacgctgaggactgtgcc
atccacaacgaggagtttgctgtcatcacggggctgcctctctatgctgctgcacgcgca
ggtaatgaggacatagctagtttcctgctgcagaatggtgctgggttctcctcctacacc
ctgatggattatcctgccttcagcagactgctccttgaacaacgactgctactatgtggc
cgttggtcaggtctgaagctgccgtggttggagctggactggttcatggacgtgtcgtcc
cgtatctcccacctggacctgtcctgtaacagcctcagcaccctgccctccgtggttccc
tgggggctcatacagctccagaccctagacctctccaacaacctgttcaaagagctgccc
acagcacaaagctcacaggagatcatctgctcaagacttcgccaggtgaatctgtctcag
aatgagttgaccagcctgccgtccggactgctccatctcaccagagtccaaaagctctcc
gctgttaagaacaagctcacctccctatttgacattcctaatggtactaactggataggt
ctgcgtaagctggaggagctggatgtgtctgataactgtctgaccagtcttccttctgct
gttctgcactctttcaaatcccttacgtccctcaaagtctgccggaacagactcaccagc
ttccctgacccctgggcctgccctctgaagcactgtcgagcctcatccaacgccatcgag
agtcttcccaataccatctccatcttctggagaactcagctgcaggaggtggatttctcg
gacaacgtcatcaaggagctgccctcctatatattcgagctggaggccctggtctctctc
agactgtgtaagaatcagatctccactctcccggcacccaacaagtggaaatgctctctg
ctcagaacccttgacctctccaggaaccagctgggcaataatccaggtattcgagagctt
ccagctgagttggggcagctctctaacctgtggcagttggacattgaggacctcaacatc
actaatgttccccaggacatcaggaaagaaggtccagcatcagtgttgtcctttctccga
gcccacctacggaaggcggagccctgtaagctgctgaaactgcttgtgattggtcctcct
cggcaggggaaagacggccctcctggaggtgttacagacgggcaggacctccctttctcc
cctgcagaacgaaacatcagcacagctacttgggaactggacagacccaatggtgttaaa
gctagcacggactctgtggcgttcaacgtgtgggacatcggcggtccggccaacatgtcc
acggtcaaccagtgtttcttcacggacaaggccctgtacgtagtcatctggaacctagct
ctgggagaggaggctgtagccaatctgcagtcctggctgcttaacattgaggcgcgtgcc
cctaactctgcggtggtggtggtgggtacccacctggacctgatcgacaccaagttccgt
acagagcgggtggccacactgagggcctacatcctggcactcagcaggtctccatcaggc
gccagggccagtggctacccagacatcacctggaaacacctgcatgaggtatcgtgtaag
acccaggagggtctggatggtctgaggaggttgatcttccaggtggcctgctacatgaag
gacaacagcagtagttcagctagcggacacaagctggtgggcagactgatcccaaagagc
tacctgacgctgcaacaagcggtgctaggtgagcgggggcggcgggacgcagaagacgag
gtccagtacctgacagacgcacagctggacctcgtcatagagcagaacccaggaagtgac
atcagagactacgaggacctgcagaccgccataagcttcctgatcgagacaggcaccctc
ctccacttcccagacaccagtcacggcctgtgtaccctctacttcctctgtcccgtgtgg
ctgtcggagtgtctggagcggatcatccacctgaagagctcccgatcgacggaggagcag
tacttccagtttctggccaagtttgagattgctctgcctgtggccagcgatagttacctc
ctcccccacctccttcctcctaaacctgctatggacatccacggcttccgccaagagacc
gccaacaccatccagcggctcttcaagatgagcttcgtgccggcgggattctgggaacgt
ttcatcgcccgcatgctcatcagcctcacagagatggacctccagtcctttgagcctaag
aagaatgctaagagcgaacggaggaggaccacggtgatctacaattttgcggggacaggc
agccaacagaggaaccgctgtagcaccttcagagtccgccgcagtaagaccatctactgg
agagagggactactggtcaccttcgacggagggtatctaagtgtggaatcgactgatgtc
aactggaagaggaagaaaagcggaggcatcaagatcatttgtcaatcagagaccagggat
ttttcagccatggccttcgttacggatcacgtcaactccctcatcgaacagtggttccct
gcactgacggccagtgagagtgatgggacccggttgattgagcagtactccccctgtccc
cagtgttcctccatgagcagacagaaccaggggcctgggagtctgggagaacccccaacc
aaggggactgcagctggaagaagaggaggagaaggcagagaaaaggttggtggaagagga
gagcacttcttcaacatggaggactgtgtgatcgctgccatggaccaggactacatagtg
tgtccccagcaccccgaccagcctgtcccccttcaggagctggtcccagagcttttcatg
accgacttcccctcacggttgtttctagagaaggcccagttggagtgtagtgaggaggag
agtgatatcctgggccaggggggcagtggagctgtcatctacagagcctgttaccgcggc
caaccagtcgccatcaaacgctttcacttcaagaagtgcaggcagcagaccatcagcagt
gatacagacaccatgatgaagcacttccagtccatggacgcgtgccggagcttctcagag
ttccgccaggaggccagcatgctccactccctgcagcacccgtgcatcgtggccctggtg
ggaatcagtatccacccgctctgcttcgccctgcagctggctcccctgggcagcctcaac
actgtgctggaggaccgacataaaggctccaggtacatgcccctgggtcacatgctcacc
ttcagggcagcctatcagatcgcagcggggctggcctacctgcacaggaagaacataatc
ttctgtgacctcaagtcagacaacatcctggtgtggtccctggaggtgtgtgacctggtg
aatatcaagctgtcggactacggcatctcgcgccagtccttccacgagggggcactgggg
gtggagggcacgccgggataccaggcccccgagatacgcccaggcatcgtttatgatgag
aaggtggatatgttctcgtatgggatggttgtgtatgagttgctgtcaggttgtaggcct
gcgttgggccagcaccagctccagatagctaagaagctgtctaaagggatccgtccggcc
ctggggagcccagaggaagtccagttccactgtctgcacggcctgatgatcgagtgctgg
gacactaagcctgagaagctcttcctgtcccacctgcagggacacagcgctgtcttctgg
gacggggacaaggacgacaggagcagggaagtgtccatctacagtctaaaggagatgtgt
ccactgagccagccccagaaacagctctcctgtcctgctatagtcacctgtctgttcccc
gtgcccgccagagaccagagaccaggtaactctcctgtagtcacctgtctgttccccgtg
cccgccagagaccagagaccaggtaactctcctgtagtcacctgtcttttccctgtgccc
gccagagaccagagaccaggtaactctcctgtagtcacctgtcttttccttgtgcccgcc
agagaccagagaccaggtaactctcctgtagtcacctgtctgttcccccgggctcgccag
agaccaggtaactctcctgtagtcacctgtcttttccctgtgcccgccagagaccagacc
caggcgcgtgtcttcatggggatgtcagacggtctggtggcagtgtactccctggtggat
gacatgcctgtagaaggagagacctatctgtgttctcacaccctcaatacgaccatgttt
gggatggaggactctgacccaagacagagaccctacccactgtggtactcccatggtcca
ggcctgctggtgatcaactgccggacccctccaggcggtgtcgtctggaccccctacgac
cccccatcctccatacaggccctggcctccagcctctgtctgtcaggggatgaggcagtg
gggaccctggacgaccacaccaacaccctacagctctaccacgctgccacctaccagctc
tgtgccacgtacaggtgtgtgagacctgtggcgacgccaacccctccgggacgtgttcac
tgtacagcgacctgcaggggttaccatggatacgaccctgaccttgactcaaagaggaag
ggtctagaggaggaggaggaggagtgtcctaacggcgaagtgacgctgatctacagcgcg
gaggcagggactcagatcatccagcaccaggattcgcgacggactactgctccagtcctc
tga
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