Entry |
|
Name |
(RefSeq) interferon beta-like
|
KO |
|
Organism |
cclu Coregonus clupeaformis (lake whitefish)
|
Pathway |
cclu04060 | Cytokine-cytokine receptor interaction |
cclu04620 | Toll-like receptor signaling pathway |
cclu04621 | NOD-like receptor signaling pathway |
cclu04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123482511
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
123482511
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123482511
04621 NOD-like receptor signaling pathway
123482511
04622 RIG-I-like receptor signaling pathway
123482511
04623 Cytosolic DNA-sensing pathway
123482511
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123482511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:cclu04052]
123482511
Cytokines and neuropeptides [BR:cclu04052]
Cytokines
Interferons
123482511
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
35:10753275..10754260
|
AA seq |
186 aa
MALQTITWMSAFLCLAQVCSMPMPCQLQGQLVRTTHNLLRDMGGHFPLECLQHNVFLAFP
AAAFATGAPQLSSSGAKAIYDTLKNIDSLFGADDLPTKWDQQKLENFQNIIYRQIEESKC
MMGSVDTSDYPIRAEGLNAYFGHIAAVLKEKNFSYCAWEVVRKELLYTLQFILEHNSDSL
LWSNRT |
NT seq |
561 nt +upstreamnt +downstreamnt
atggcacttcagactatcacttggatgagcgccttcctctgcctcgcacaagtttgctcc
atgcccatgccttgccagctacaaggccagctggtgcgaacaacccacaacctactgaga
gacatggggggtcattttcctctggagtgcctgcagcacaatgtcttcctggcattccca
gccgccgcatttgcaaccggcgcgccacagttgagcagcagcggtgctaaggctatttat
gatacattgaagaacatcgactcattgtttggagctgacgacctgcccactaagtgggac
caacagaagttggagaattttcagaatattatataccgccagattgaagagagcaaatgt
atgatgggcagtgtggatacaagtgattatcccatcagggcagagggactgaatgcatac
tttgggcacattgcagcagtcctaaaagaaaagaatttcagttactgcgcctgggaagtg
gttcgaaaagagctcctgtacaccctacagttcattctggaacacaactctgatagcctt
ttgtggtccaacagaacatga |