KEGG   Coregonus clupeaformis (lake whitefish): 123482511
Entry
123482511         CDS       T08357                                 
Name
(RefSeq) interferon beta-like
  KO
K05414  interferon alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04217  Necroptosis
cclu04620  Toll-like receptor signaling pathway
cclu04621  NOD-like receptor signaling pathway
cclu04622  RIG-I-like receptor signaling pathway
cclu04623  Cytosolic DNA-sensing pathway
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    123482511
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    123482511
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    123482511
   04621 NOD-like receptor signaling pathway
    123482511
   04622 RIG-I-like receptor signaling pathway
    123482511
   04623 Cytosolic DNA-sensing pathway
    123482511
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    123482511
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    123482511
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Interferons
   123482511
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 123482511
NCBI-ProteinID: XP_045066564
LinkDB
Position
35:10753275..10754260
AA seq 186 aa
MALQTITWMSAFLCLAQVCSMPMPCQLQGQLVRTTHNLLRDMGGHFPLECLQHNVFLAFP
AAAFATGAPQLSSSGAKAIYDTLKNIDSLFGADDLPTKWDQQKLENFQNIIYRQIEESKC
MMGSVDTSDYPIRAEGLNAYFGHIAAVLKEKNFSYCAWEVVRKELLYTLQFILEHNSDSL
LWSNRT
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcacttcagactatcacttggatgagcgccttcctctgcctcgcacaagtttgctcc
atgcccatgccttgccagctacaaggccagctggtgcgaacaacccacaacctactgaga
gacatggggggtcattttcctctggagtgcctgcagcacaatgtcttcctggcattccca
gccgccgcatttgcaaccggcgcgccacagttgagcagcagcggtgctaaggctatttat
gatacattgaagaacatcgactcattgtttggagctgacgacctgcccactaagtgggac
caacagaagttggagaattttcagaatattatataccgccagattgaagagagcaaatgt
atgatgggcagtgtggatacaagtgattatcccatcagggcagagggactgaatgcatac
tttgggcacattgcagcagtcctaaaagaaaagaatttcagttactgcgcctgggaagtg
gttcgaaaagagctcctgtacaccctacagttcattctggaacacaactctgatagcctt
ttgtggtccaacagaacatga

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