Coregonus clupeaformis (lake whitefish): 123482522
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Entry
123482522 CDS
T08357
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
123482522
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123482522
04082 Neuroactive ligand signaling
123482522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
123482522
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
123482522
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GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
123482522
NCBI-ProteinID:
XP_045066607
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Position
35:complement(25638646..25693968)
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AA seq
681 aa
AA seq
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MGVRLGCLSDSPWWWPLLLLLCTAPRCQGRPFATPLPAVNVAVVFSGSAYQQEIKGRLSR
ENFMDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFIA
LQTAVPIVGISGGSAMVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVITSLY
PGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCSHE
EAQYLFSMAGEAGLLGPGYIWILPSLAVGNPDMPPPNSFPVGLISIITDRWRMSLRKRVR
DGVAIVVKGVQSFRKQRGFIPEGHNDCHSPVRASSNDTLFRHMLNVTWEHNDFSFNPEGY
LINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEERP
FVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTTKF
SYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVETGI
SVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYCSPVGYNRSLVSAKD
PGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKVMVLVWAFFAVIFLASYTANLAAFM
IQEQYTDTVSGLSDKKFQKTQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccatggtggtggccgctgctgctgcta
ctctgcactgccccccggtgccaaggccggccgttcgcaacgcccttgccagcagtcaac
gtggcagtggtgttcagcggctcggcctaccagcaggagatcaaggggcgtctcagcagg
gagaacttcatggacctgcccttggaggtgaaccccatcacagtgctggtaaacaacacc
aaccctcggaccctgctcacacgcatctgtgacacactggcggccaaccgcgtccatggc
gtggtgtttgaggacaatattggctcggaagccgtggcacagatcctggacttcattgca
ctgcagacggccgtgcccatcgtgggcatcagcgggggctccgccatggtcctgccacat
aagggcgacggctccacgttcctccagctgggatcctccatcgagcagcagatcaacggc
atgttcaaggtgatggaggagtacaactgggacagtttcgtggtcatcaccagcctgtac
ccgggctatgaggtctacgtggactatgtcaagaccttcaccgacaccagctacttcatg
tgggaactgcaggacgtgctgaccttcgacatgtctgctgacggcatgaacgacatccgg
gcacggcgcctgctgcagcagatcgacgcccaggtgctgctggtatactgctcccatgag
gaggcccagtacctgttcagtatggccggagaggccggcctgctggggcctggctacatc
tggatcctccccagccttgccgtagggaacccagacatgcccccaccaaacagcttccct
gtgggcctcatcagcatcatcaccgaccgctggcggatgagcctgaggaagagggtgcgg
gacggggtggccatcgtggtcaaaggggtgcagagcttccgcaaacagaggggcttcatc
cccgagggccacaacgactgccacagccctgttagggcatcttctaatgatacactattc
aggcacatgttaaacgtaacatgggaacacaacgacttctcgttcaaccctgaagggtac
ctgatcaacccagccatggtcatcatcaccttagaccgggagagacagtgggataaggtg
gggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctacggcact
tatctggagcctgtatcagataacagacacttgactgtggccaccctggaggaacgtccc
tttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacactgtgccc
tgccgccgccagtccaacaagacagagactattgtaggccatactgagccctacaccaaa
ctgtgctgtaagggtttctgcatagacatcctgaagaagctgtcccgcaccaccaagttc
tcatacgacctctacctggtcaccaatgggaagcacggcaagctggtcagaggcagttgg
aacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcgctgacc
ataaacgaagagcgctcagaaattattgacttctccgtgccgttcgtggagacggggatc
agtgtgatggtcgccaggagcaacgggaccgtctcaccctctgcctttcttgagccctac
agtccggcggtgtgggtgatgatgtttgtgatgtgcctaacggtggtagcagtcacagtg
tttatctttgagtactgcagccctgtggggtacaaccgcagtctggtgagcgccaaggat
cccggaggccccaccttcactattgggaagtcagtgtggctgctgtggggcatcgtcttc
aacaactctgtccccattgagaaccccaagggcaccaccagcaaggtcatggtcctggta
tgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggcagccttcatg
atccaggagcaatacactgacacagtctctggactgagtgacaaaaagttccagaagacc
caatga
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