Coregonus clupeaformis (lake whitefish): 123482638
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Entry
123482638 CDS
T08357
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
123482638
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123482638
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123482638
Prokaryotic type
123482638
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
123482638
NCBI-ProteinID:
XP_045066972
LinkDB
All DBs
Position
35:complement(34028220..34029944)
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AA seq
296 aa
AA seq
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MAGTVTGVTVPKHSLSKLQSLNGLFAIYKKEGPTSADVLNSLKEALLKEAGVKDPNPRKR
KKQVLKMGHGGTLDSAASGVLVVGIGNGTKMLSTMLAGSKKYMAVGELGKATDTLDATGN
VVHEKLYDHITREAFEEKLKQFTGDVMQVPPLYSALKKDGKRLSVLLKQGHEVEAKPARP
VTVYNLSLQDFTPPLFTLDVECGGGFYIRSLVDDLGKALSSCAHVRKLIRTKQGQFTLDA
HTLREEHWTLQHIVQSMQPCPGSEVTKEDGTSPNLGVELNVQVKGDKNGKDEKGAL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacagtaactggcgtaactgtgcctaaacattctttgtcaaaactacaatct
ttaaatggactttttgccatttataaaaaggaaggacctacgtctgctgatgtattaaac
tcattaaaagaggcactcctcaaagaggccggtgtgaaagatcctaatcccagaaagagg
aagaagcaagttttgaaaatggggcatggcgggactctggacagtgcagcctctggtgtg
ctcgttgttgggattggaaatggaacaaagatgcttagtactatgctggctggttcaaag
aaatacatggctgttggagagttgggaaaagcaacagacacccttgacgccacaggcaat
gtggttcatgagaagctctatgatcacattaccagggaagcctttgaggagaagttgaag
cagttcacaggggatgtcatgcaggttcctccactgtactctgcactgaagaaggatggc
aagcgtctgtctgtcctgctgaagcaaggccacgaggtggaagccaaacctgcacggccg
gtcacagtgtataacttgtcactgcaggacttcacaccccccctcttcactcttgacgtt
gaatgcggtggtggattttatatcagaagcttggtggacgacctgggaaaagcactctcg
tcgtgtgcccacgtgaggaagctgatccggaccaaacagggtcagtttacccttgacgcc
cacacgctgcgggaggaacactggacactgcagcacattgttcagtccatgcagccctgt
cctgggtcagaggtcaccaaggaggatggcacaagcccaaacctgggggttgaactgaac
gtccaggtgaagggggataagaatggcaaagatgaaaaaggggcgttataa
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