Coregonus clupeaformis (lake whitefish): 123482899
Help
Entry
123482899 CDS
T08357
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123482899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP_C
GBP
Mis12
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
123482899
NCBI-ProteinID:
XP_045067956
LinkDB
All DBs
Position
40:10390453..10409099
Genome browser
AA seq
556 aa
AA seq
DB search
MWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTLVYNSQGTINNDAV
EKLQYVNELTEMIKVKSHTDNEEEGECTQFMQFFPDFVWTIRDFTLQLEVDGREITPDQY
LENSLQLKKGTSKKINDYNLPRECIRKFFPARKCFVFPSPTTPDNMKRLESMDEDELSES
FREVADTFCRFIFEESRVKTVIGGHTLTGEMLGHLVNTYVETIAKGNVPCLENAVLAMAK
IENQAAMDEGLAVYQKGMEDVKDLFPVDINQLSEKHLSSETQATQAFMKRSFKDENGEFL
KSLAEAIRNHAVDLFKQNKDASEKKCKAILEKLSAPMDQGMKDGMYTTPGGYELYRNHHD
NIVAQYRAEPNKGVRAEEVLEQFLKGRSAESNSILQADRKLTKNEKKIQAEKKKTAELEQ
EKAAFKEQKAELERTIENIEKGQDKYLKEMKEKMEEERKQQQQEFNRTLERTMQEQKDLM
EKGHKEKADLMRQEIEEMKKMNQLEREQYTQNQMALLESLKQQGEGQIMMMEAFIQALNN
RSQPPVHVVKPSSIVM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtgtccctcatcctgaaaaaacagaccacaccctggtgctgctggatacagag
gggctgggggacgtggagaagggagattctaagaatgatgcctggatcttctccctggcc
attctgttaagcagtactctggtctacaacagtcaagggaccatcaacaatgatgctgtg
gagaagcttcaatatgtgaacgagctgacagagatgatcaaggtgaagtctcacactgac
aatgaggaggaaggagagtgtacccagtttatgcagttctttcctgattttgtgtggacc
atcagagatttcactctacagcttgaggtcgacggcagagaaatcactccagaccagtat
ctggagaattccctgcaactcaagaaaggtactagtaaaaagatcaatgactacaacctt
ccacgagagtgcatccggaagttcttccccgcacgcaagtgttttgtgttcccctcccct
acaactcctgacaacatgaagcgactggagtccatggatgaggatgagctttctgaaagc
ttccgagaggtggcagatactttctgccgcttcattttcgaggagagccgtgtgaagact
gttatagggggacacacattgaccggagagatgctaggccacttggtaaacacctatgtg
gagaccatagccaaaggcaatgtgccctgtctggagaatgcggtgctggccatggctaaa
attgagaaccaggctgctatggatgagggcctggcggtgtaccagaagggcatggaggat
gtgaaggacttattccctgtggacatcaatcagctgtcagagaagcacctcagctcagag
acccaggccacgcaggcgttcatgaagcgatccttcaaagacgaaaatggggaattcttg
aaatctctggcggaggccattaggaaccacgccgttgaccttttcaaacagaacaaggat
gcctcagagaagaagtgcaaggccattctggagaagctgtctgctccgatggatcagggg
atgaaggatgggatgtacaccacaccgggaggctatgagctttaccgcaatcaccatgac
aacatagtggcacagtaccgggccgagcccaacaaaggagtcagggctgaggaggttctg
gagcagttcctgaagggaaggagtgcagagtccaactccatcctgcaagctgacagaaaa
ctgactaaaaatgagaaaaaaatccaagctgagaagaagaaaacagctgagctggagcag
gagaaggcagcattcaaggagcagaaggcagagttggagcgcaccattgagaacattgaa
aagggccaggataagtatttgaaggagatgaaagagaagatggaggaggagaggaagcaa
cagcagcaggagttcaacaggaccctggaacgcacgatgcaggagcagaaagatctcatg
gagaagggccataaggagaaggctgacctaatgagacaagagatcgaggagatgaagaag
atgaatcaattggaaagggaacaatatacccagaatcagatggctctgctggaaagctta
aagcagcagggtgaaggacagataatgatgatggaagcgttcatacaggcgctcaacaat
agatcacagccccctgttcatgttgttaaaccaagcagtatcgtaatgtga
DBGET
integrated database retrieval system