Coregonus clupeaformis (lake whitefish): 123482949
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Entry
123482949 CDS
T08357
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123482949 (gigyf1a)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123482949 (gigyf1a)
Surveillance factors
Other surveillance factors
123482949 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Activator_LAG-3
TRI4_N
Motif
Other DBs
NCBI-GeneID:
123482949
NCBI-ProteinID:
XP_045068113
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFASILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEDGEVGFGRGAREMHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAGARRLDDGGPR
SAGWREHDCLVEGRRRKFEFDFSGGRRRAGSEGLEDDRDGLPEWCTDEEEGEMGTFDASG
AFLPISKGGKEEEFDFQGIEEEEEEGESVSDIERIMNGGQRVDVKESAGTSRSSSSSSSS
SPPGPLSAPPALGLNPPMPQLSLTVAELEASQMANSHPVPVPVKASKMPSEVLEASPAGC
STTQQSPSTSSLPSPPPSSSAANHLPLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEE
ESFTQTLQDGRNTAAALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLV
KRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLGNMDQDRLKKQQQQDLAAATLYQQLQQ
QQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGGEASLWDLTMNSSTQG
PTLEQLQKLQLERREAELRTKREEEEQRKRREEKRRQQEEQKRREEEEIFRRKQCRQQQE
LIMKLLQQGSGSGVGSGWGTGALNKPGAKGLSLLDMQEAERLLKQQQRAQQQQRERHQGL
SMGGSSMGQWGDGGAVPGGLWGGGGGMEGKAGGGGGMGLWDEAVKNQTRSSSMQGLKNSR
SSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQMLHALNTQANNTSSPL
DVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERRAKQKQNLQRQQQQLSKE
VAGLTMNNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQGGMKKKKQPVMLHSDPSIL
GYSYHNAGERLSLNEMEMVEDY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtcccccccgccttctcccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgcttctattctgcaagatgagcccatgcagccactggcactggag
ccactcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggagttgccccagcgggcgtggcccgaggcagaggcacc
acgcgaggaggaggccgagggcgaggtcgtggagagagtggaggattctaccaaagaagt
attgaggacggagaggtaggcttcggccgtggagccagagagatgcaccgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgaccggtgtcccagtgcctggggtaccgaggaaggactacaca
cggtcggacagtgagaactggcgtaccctccgagaggagcaggaggaagaggagggggcc
gaccccgggggcagctggagactggccggagcacggagattagatgacggaggtccaagg
tcagcaggctggcgggagcacgactgtctggttgaggggcgtcgcaggaagtttgagttt
gacttcagcgggggtcgcaggcgggccgggagcgaggggttagaggacgacagagacgga
ctgcctgagtggtgcactgatgaagaggaaggagagatgggcacctttgacgcttctggg
gccttcctccccatatccaagggtggaaaggaggaggaatttgacttccagggaatagaa
gaggaggaagaagagggggagagtgtttctgacatagaaaggatcatgaatggaggacag
agagtagatgtaaaggaatccgctgggactagtcgctcttcctcctcttcctcctcctcc
tctccccctggccccctctctgcccctccagctctgggcctcaacccccccatgccccag
ctgtccctcaccgtggctgagctggaggcctctcagatggccaacagccaccctgttcct
gtccctgtcaaggccagcaagatgccaagtgaagttctcgaggcctctccagcagggtgc
tccaccacccaacagagccccagcacctccagtctgccttcaccccctccctcctcctct
gctgctaaccacctccccctgccaccggggggcgacaccgaggacgacgagggcatgaaa
cacctgcaacaggaggcagagaagatggtggcgtccctgcaggacacgtctttagaggag
gagagcttcactcagacgctgcaggacggcagaaacacagcggcagcactaccactctcc
cacgacgctgccatgaagtggttctacaaggacccccaggcagagatccagggtccattc
accaccctggagatgtgtgagtggttccaggcgggctacttctccatgtctctgctggtg
aagaggggctgtgacgagggcttccagccgctgggtgacgtcatcaagatgtggggacgt
gtgcctttcgcccccgggccctccccgccgcccctgctgggtaacatggatcaggaccgt
ctgaagaagcagcagcaacaggacctggcagcagcaaccctctatcaacagctccagcag
cagcagcagctattccagctcatcagcaggtgcggagagcagggtatcttgccttcggtg
aacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagcaatcaggcggtgaagccagtttatgggacttaacaatgaattcttcaactcagggt
ccaactctcgaacagcttcagaagctccagctggagaggagagaagctgaactcaggacg
aagcgtgaggaggaggaacagcgcaagaggagggaagagaagaggaggcagcaggaggag
cagaagaggagggaggaggaggagatcttcagacgcaaacagtgtcgccagcagcaggag
ctgatcatgaagctgctccagcagggctcaggctccggggtgggatcaggctggggcact
ggggccctcaacaagccaggggccaagggcctcagtctgctggacatgcaggaggcagag
aggcttcttaaacagcagcagagagcccagcagcagcagagagaacgtcaccaaggcctg
tccatggggggttcctccatgggtcagtggggggacggaggtgctgtcccggggggcctg
tggggaggcggaggggggatggagggtaaggctgggggcggcggaggcatgggtctgtgg
gacgaggcggtgaagaaccagaccagaagcagcagcatgcaaggtctgaagaacagccgc
agcagcccctcactcagtgagcagtatatgctgagctgtaggaagcagcgtacggatgag
gaggacaagctgctgaagctgctgcagggcatcaagacgcctcaggatgggttcaccacc
tggtgtgaacagatgctgcacgccctcaacacccaagccaacaacacctcctctccactg
gacgtgtccaccatcgtggcgtacctgaaggaggtggagtctccctacgaggtccatgac
tttatccgctcttacctgggagacaccatggaagccaaagagtttgccaagcacttcctg
gagcgccgtgccaaacagaaacagaacctgcagaggcagcagcagcagctatcaaaggaa
gtagcagggctgaccatgaacaacttccctctgccggactccatgcggggggtgagcccc
agcaccctgcagtccatgttccaggcggcccagatggggaagggaggtctgtacgacacc
caggggggcatgaagaagaagaaacagcctgtgatgctgcactctgaccccagcatctta
gggtactcataccacaacgcgggcgagcgtctgagcctgaatgagatggagatggtggag
gattactga
DBGET
integrated database retrieval system