KEGG   Coregonus clupeaformis (lake whitefish): 123482949
Entry
123482949         CDS       T08357                                 
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    123482949 (gigyf1a)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     123482949 (gigyf1a)
   Surveillance factors
    Other surveillance factors
     123482949 (gigyf1a)
SSDB
Motif
Pfam: GYF GYF_2 Activator_LAG-3 TRI4_N
Other DBs
NCBI-GeneID: 123482949
NCBI-ProteinID: XP_045068113
LinkDB
Position
Unknown
AA seq 1042 aa
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFASILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEDGEVGFGRGAREMHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVPRKDYTRSDSENWRTLREEQEEEEGADPGGSWRLAGARRLDDGGPR
SAGWREHDCLVEGRRRKFEFDFSGGRRRAGSEGLEDDRDGLPEWCTDEEEGEMGTFDASG
AFLPISKGGKEEEFDFQGIEEEEEEGESVSDIERIMNGGQRVDVKESAGTSRSSSSSSSS
SPPGPLSAPPALGLNPPMPQLSLTVAELEASQMANSHPVPVPVKASKMPSEVLEASPAGC
STTQQSPSTSSLPSPPPSSSAANHLPLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEE
ESFTQTLQDGRNTAAALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLV
KRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLGNMDQDRLKKQQQQDLAAATLYQQLQQ
QQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGGEASLWDLTMNSSTQG
PTLEQLQKLQLERREAELRTKREEEEQRKRREEKRRQQEEQKRREEEEIFRRKQCRQQQE
LIMKLLQQGSGSGVGSGWGTGALNKPGAKGLSLLDMQEAERLLKQQQRAQQQQRERHQGL
SMGGSSMGQWGDGGAVPGGLWGGGGGMEGKAGGGGGMGLWDEAVKNQTRSSSMQGLKNSR
SSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQMLHALNTQANNTSSPL
DVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERRAKQKQNLQRQQQQLSKE
VAGLTMNNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQGGMKKKKQPVMLHSDPSIL
GYSYHNAGERLSLNEMEMVEDY
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtcccccccgccttctcccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaggagtttgcttctattctgcaagatgagcccatgcagccactggcactggag
ccactcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggagttgccccagcgggcgtggcccgaggcagaggcacc
acgcgaggaggaggccgagggcgaggtcgtggagagagtggaggattctaccaaagaagt
attgaggacggagaggtaggcttcggccgtggagccagagagatgcaccgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgaccggtgtcccagtgcctggggtaccgaggaaggactacaca
cggtcggacagtgagaactggcgtaccctccgagaggagcaggaggaagaggagggggcc
gaccccgggggcagctggagactggccggagcacggagattagatgacggaggtccaagg
tcagcaggctggcgggagcacgactgtctggttgaggggcgtcgcaggaagtttgagttt
gacttcagcgggggtcgcaggcgggccgggagcgaggggttagaggacgacagagacgga
ctgcctgagtggtgcactgatgaagaggaaggagagatgggcacctttgacgcttctggg
gccttcctccccatatccaagggtggaaaggaggaggaatttgacttccagggaatagaa
gaggaggaagaagagggggagagtgtttctgacatagaaaggatcatgaatggaggacag
agagtagatgtaaaggaatccgctgggactagtcgctcttcctcctcttcctcctcctcc
tctccccctggccccctctctgcccctccagctctgggcctcaacccccccatgccccag
ctgtccctcaccgtggctgagctggaggcctctcagatggccaacagccaccctgttcct
gtccctgtcaaggccagcaagatgccaagtgaagttctcgaggcctctccagcagggtgc
tccaccacccaacagagccccagcacctccagtctgccttcaccccctccctcctcctct
gctgctaaccacctccccctgccaccggggggcgacaccgaggacgacgagggcatgaaa
cacctgcaacaggaggcagagaagatggtggcgtccctgcaggacacgtctttagaggag
gagagcttcactcagacgctgcaggacggcagaaacacagcggcagcactaccactctcc
cacgacgctgccatgaagtggttctacaaggacccccaggcagagatccagggtccattc
accaccctggagatgtgtgagtggttccaggcgggctacttctccatgtctctgctggtg
aagaggggctgtgacgagggcttccagccgctgggtgacgtcatcaagatgtggggacgt
gtgcctttcgcccccgggccctccccgccgcccctgctgggtaacatggatcaggaccgt
ctgaagaagcagcagcaacaggacctggcagcagcaaccctctatcaacagctccagcag
cagcagcagctattccagctcatcagcaggtgcggagagcagggtatcttgccttcggtg
aacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagcaatcaggcggtgaagccagtttatgggacttaacaatgaattcttcaactcagggt
ccaactctcgaacagcttcagaagctccagctggagaggagagaagctgaactcaggacg
aagcgtgaggaggaggaacagcgcaagaggagggaagagaagaggaggcagcaggaggag
cagaagaggagggaggaggaggagatcttcagacgcaaacagtgtcgccagcagcaggag
ctgatcatgaagctgctccagcagggctcaggctccggggtgggatcaggctggggcact
ggggccctcaacaagccaggggccaagggcctcagtctgctggacatgcaggaggcagag
aggcttcttaaacagcagcagagagcccagcagcagcagagagaacgtcaccaaggcctg
tccatggggggttcctccatgggtcagtggggggacggaggtgctgtcccggggggcctg
tggggaggcggaggggggatggagggtaaggctgggggcggcggaggcatgggtctgtgg
gacgaggcggtgaagaaccagaccagaagcagcagcatgcaaggtctgaagaacagccgc
agcagcccctcactcagtgagcagtatatgctgagctgtaggaagcagcgtacggatgag
gaggacaagctgctgaagctgctgcagggcatcaagacgcctcaggatgggttcaccacc
tggtgtgaacagatgctgcacgccctcaacacccaagccaacaacacctcctctccactg
gacgtgtccaccatcgtggcgtacctgaaggaggtggagtctccctacgaggtccatgac
tttatccgctcttacctgggagacaccatggaagccaaagagtttgccaagcacttcctg
gagcgccgtgccaaacagaaacagaacctgcagaggcagcagcagcagctatcaaaggaa
gtagcagggctgaccatgaacaacttccctctgccggactccatgcggggggtgagcccc
agcaccctgcagtccatgttccaggcggcccagatggggaagggaggtctgtacgacacc
caggggggcatgaagaagaagaaacagcctgtgatgctgcactctgaccccagcatctta
gggtactcataccacaacgcgggcgagcgtctgagcctgaatgagatggagatggtggag
gattactga

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