Coregonus clupeaformis (lake whitefish): 123483423
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Entry
123483423 CDS
T08357
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20012
growth differentiation factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
123483423
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123483423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
123483423
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
123483423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Dsh_C
Motif
Other DBs
NCBI-GeneID:
123483423
NCBI-ProteinID:
XP_045069338
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MDAFQVLSLYLLLIFIWNIPCFQSAAIISPSVPRRNKGAKILHDGQRSTKFLKEIFASSP
ILSHHQEDFNKDAIVPHDYMLSIYRTYSAAERLGLNASFFRSSKSANTITSFVDRGTDDL
LHSPLRRQKYLFDVSTLSDKEELVGAELRIFRKVPGDLQTSPTGLYDIQLLSCRSERLLD
SRSLDPLDSRKPGWEVLDVWEMFKNRHHSDQGSQICLQLKGTLGKSEMEIDLKQMGFDRT
GRTQQEKAILVVYTRSKKRENLFNEMKEKIKSRGSGSRSEEERGLQFKARRRRRTALNNR
HGKRHGKKSKSRCSKKALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHA
IIQTLMNSMDPNSTPPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatttcaagtattatcgttatatttgttactcatcttcatttggaatatacca
tgttttcagtcagctgccatcatatctccctctgtgccaaggagaaacaagggagccaag
atccttcatgatggacaaaggtcaaccaaatttctcaaagagatcttcgcatcttctcct
atcttaagccatcaccaagaagactttaataaggacgcaattgtgccccacgattacatg
ctctccatatacaggacgtattcggctgcagagagactcggactaaacgcaagttttttc
cgctcctcaaagtctgcaaacaccataacaagttttgtggacagaggaacagacgatctc
ttgcactctcctttgcgaagacaaaagtatctgtttgatgtctcaaccctttcagacaaa
gaggagttggttggagctgaattaaggatatttagaaaagtgcccggggatttgcaaacg
tccccgacaggtctctatgacattcaattactctcctgtcgatcagaacggctactggat
tccagatcccttgatcctctggattcccgaaaaccaggatgggaggttttggacgtgtgg
gaaatgtttaaaaaccggcatcactctgatcaggggagccagatttgtctccagctcaag
ggcactcttggtaaatcagaaatggaaatcgatttaaaacagatgggatttgacagaacc
ggccgaacccagcaagagaaggccatcttggtggtttacaccaggtccaagaaaagggag
aacctgttcaacgaaatgaaagagaagatcaagtcgcgtggatcggggagcaggtcggag
gaggagaggggcctgcagttcaaagccaggcgccgacggaggactgcattgaacaatcgg
catgggaaaagacatggcaaaaagtccaaatctagatgcagcaaaaaggctctgcacgtt
aattttaaagagctagggtgggatgactggatcattgcgccattggattatgaggcgtac
cactgcgagggtgtgtgcgacttccctttgagatcgcatttagagccaacaaaccatgcc
atcattcaaactcttatgaattcaatggaccccaatagcacacctcctagttgttgtgtt
cccaccaaactaagtcccatcagcattctttacatagactcgggtaataacgttgtgtac
aaacagtacgaggacatggtggtagagcagtgtggctgcaggtag
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