Coregonus clupeaformis (lake whitefish): 123483488
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Entry
123483488 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 19-like
KO
K10285
F-box and leucine-rich repeat protein 19
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123483488
04121 Ubiquitin system [BR:
cclu04121
]
123483488
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123483488
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123483488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
LRR_4
LRR_6
Motif
Other DBs
NCBI-GeneID:
123483488
NCBI-ProteinID:
XP_045069592
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MSGSKALGGARRRRTRCRRCQACMRIECSECHFCKDMKKFGGPGRMKQSCLLRQCTAPVL
PHTAVCFSCGEAGKEDTVDTEEEKFSLSLMECTICNEIIHPSCLKMGKAEGIINDEIPNC
WECPKCHKEGKTSKDGGDGSGKRRMDNGEVGRWKLTDDPPPTKRNPLLFRGRGRQDGHKR
KKEKELPQDSGPKKKMKGAHEKRLKKKQKPNVSETAESNGPNSSTGGGQGSGGGSNSTQS
PTSTASQDQRSHHREKLERFKQMCQLLERVRESSSSSSSTSESDSESDSDSPSGSDGRRG
SEPSSPAPVAYSNSARERNRERDRERDRRLAELGFSASEDSEGEGSVKEEEEAVEEQVVG
DKPRRRGEGPPRGRKGLTTDGNDEESGERSRKSTPLPPPSPLSSTQPPPSSGHGPSPGSE
GFTSKRSNGSETRNGRTRAGVRDRETQEKENANNSSSGGGSVANHRHGTGKGNKGNKIRS
NKQSGSQPTSRNSSNSSASTATTTSNGGGEGLLGPGSNSSGGMSALAASPRSQPSRMAPR
SQMMKRSPPAVPSPPRPVQMERHLVRPPPACPEPHCLPLDSGSSHVMPRDVWLRVFQHLS
QRELCVCMRVCRTWSRWCCDKRLWTQIDLSRQRSITPPMLSGIIRRQPVSLNLGYTNISK
KQLMWLINRLQGLLELNVSGCPWSSVSALCQAVCPCLRLLDLSRVEDMKDSHLRELLAPP
ADTRTAHGESRGGRFQNVTELRLAGLDLTDVTSRLLVRYLPHLTKLDLSQCGNITDQTIH
TLTSPMSPLKDSLTHLNLAGCVKVTEQCLPLLRRCASLQSADLRSCTLLTPDACQLLSFP
CPDDRVLLKNS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagtaaggctctgggaggggcacggcggcggcggacgcggtgccggcgctgt
caggcctgcatgcggatagagtgcagcgagtgccacttctgcaaggacatgaaaaagttt
ggcgggcccggaaggatgaagcagtcctgtctgctccgacagtgcacagcgcctgtgttg
ccccacacggcagtgtgcttctcgtgtggggaggcggggaaggaggacacggtggacacg
gaagaagagaagtttagcctctctctgatggagtgtaccatctgcaacgagatcatccac
cccagctgcctcaagatgggtaaagcagaaggcatcataaacgatgaaatcccgaattgt
tgggagtgtccaaaatgccacaaggaaggcaagaccagtaaggacgggggtgatggctca
gggaagaggcggatggacaacggggaggtgggccgatggaagctgacggacgatcctccg
cccaccaaaagaaaccccctcctctttagaggacggggaaggcaggatggtcacaagagg
aagaaggagaaggagctgccccaggacagcggccccaaaaagaagatgaaaggggcccat
gaaaaacgcttgaaaaagaaacagaagcccaacgtgtcagagactgcagagtccaatggg
cccaactcctcaaccggaggcggccagggttccggagggggttccaactccacgcagtcc
cccacctccacggccagccaggaccagcgctcgcaccaccgcgagaaattggagcgcttc
aagcaaatgtgccagctccttgagcgtgtccgcgagtccagttcatcgagctcgtctact
tccgagtccgactcggagtccgactctgactcgccttccggttcagatggccgccgcggc
tctgaaccctcctcccccgcacccgtcgcttatagcaacagtgccagggagcgcaaccgg
gaacgggatagagagagggacaggaggctggcggagctgggcttcagtgccagtgaggac
tctgagggagagggaagtgttaaggaggaggaggaggcggtggaggagcaggttgtggga
gacaagccccggcgtaggggggagggacctccacggggccgcaaggggctcacgacggac
gggaatgacgaggagagcggggagaggagtcggaagtctaccccattgcctccaccctcc
cctctctcctccacccagcctccaccttcctccggccatggcccctcgccaggttccgag
ggcttcaccagtaaacgcagcaacggctctgagacgcgcaatggacggacgcgggcgggg
gtgagggaccgagagactcaggagaaggagaacgccaacaacagcagcagcggcggaggc
tcggtggccaaccaccgacacggaactggcaagggcaacaaaggcaacaagatccgtagc
aacaagcaatcagggtcccaaccaacgtcgaggaacagtagcaactcttctgcttctact
gccactaccacatccaacgggggaggggagggcctgctgggcccaggcagcaactcctca
gggggcatgtcagccctcgccgcctcaccccggtcacagccgtcccggatggctccacgc
tcgcagatgatgaaacgcagcccccctgctgtgccctcgcctccccggcctgtgcagatg
gagcggcacctggtgcggccaccgccagcctgccccgagccccactgcctgcccctggac
agcggctcctcccacgtgatgccccgcgacgtctggctccgcgtcttccagcacctcagc
cagagggagctgtgcgtctgcatgagggtctgtcggacatggagccggtggtgctgtgat
aagagattgtggactcagattgaccttagccggcagcgctccatcacccctcctatgctg
agtggtataatccgcaggcaaccagtctcccttaacctgggctataccaacatctcgaag
aagcagctcatgtggctcatcaaccgtctacaaggtctactggagctgaatgtgtcgggc
tgtccctggtcctctgtgtcggccctgtgtcaggctgtttgtccctgcctacgtctgctc
gacctcagccgggtagaagacatgaaggactcgcacctgagggagctactggcgccccct
gctgacactcggacagctcatggagagagcagaggggggcggttccagaacgtaacggag
ctgcgattggccgggctggacttgacagatgtcacgtcccgcctgttggtgcgctacctg
ccccacttgaccaagctggacctgagtcagtgtggcaatatcacggaccagaccatccac
acactgacctcccccatgtctccactgaaggacagcctcacccacctaaacctggcaggc
tgtgtgaaggtgacggagcagtgcctgcccctgttacgccgctgtgcctcccttcagagc
gctgacctgcgctcctgcaccttgctcactcccgatgcctgtcagctcctctccttccct
tgccctgacgatagagtgctgctcaagaacagctaa
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