KEGG   Coregonus clupeaformis (lake whitefish): 123483521
Entry
123483521         CDS       T08357                                 
Name
(RefSeq) cullin-5-like
  KO
K10612  cullin 5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123483521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    123483521
   03400 DNA repair and recombination proteins [BR:cclu03400]
    123483521
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     123483521
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123483521
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 PTPlike_phytase
Other DBs
NCBI-GeneID: 123483521
NCBI-ProteinID: XP_045069648
LinkDB
Position
5:25087558..25099309
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQNRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADTKLRE
EEKRAVRYLETRRECNSVQALMECCVNSLVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEDHIMNAGLADMVAAAETITSDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTT
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSDDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEMGHYDLEVTTFQL
AVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPSVSSPKDF
TDSTLFYVNQDFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgttaaagaataaaggctccttgcagtttgaggacaagtgggac
ttgatgaggcccatcgtcctcaagttgctgagacaggaggctgtcaccaagcagcagtgg
ttcgacctcttctcagatgtccatgctgtgtgtctgtgggatgataagggcccagctaag
atccaccaggccctcaaagaagacatcctagacttcatcaaacaagctcagaaccgtgtg
ttgagtcaccaggatgacacagcattactaaaggcctacattgtggagtggaggaagttt
ttcacgcagtgtgacatcctgcccaaacccttctgtcagctggagatcacactgatgggg
aagcagggcagcaacaagaagtctaacgttgaggacagcatcgtacgcaagttgatgttg
gacacatggaatgagtcgatcttctccaacataaagagccgtcttcaggacagtgctatg
aagctggttcacgctgagaggctgggagaggcttttgactcacagctggttataggagta
agagaatcatacgtcaacctgtgctctaaccctgaagacaagctccagatctacagagat
aactttgagaaggcctacctggactcaaccgagaggttctacagaacacaggccccatca
tacctacagcagaacggagtccagaactacatgaaatatgcagacacaaagctaagagaa
gaggaaaagagggcagttcgataccttgagactcgtcgtgaatgtaactctgtccaagca
ctgatggaatgttgtgtgaactctctggtgacgtcgtttaaagaaaccatcctggccgaa
tgccccggcatgatcaaacgcaacgagacagacaagctccacttgatgttttccctgatg
gataaagttcctagtgggatagagcccatgctgaaagacctggaggatcacatcatgaat
gctgggctggctgatatggtggctgctgcagagactatcacttctgactctgagaagtat
gtggagcagctgctgacgttgtttaaccgtttcagtaaactggtgaaggaggcttttcag
gacgaccctcgattcctcaccgccagagacaaggcctacaaagctgtggtgaacgatgcc
accatctttaaactagagctgcccctcaaacagaaaggggtaggtctgaagacccagcct
gagtcgaagtgtccagagctgctagctaactactgtgacatgctgctgaggaaaaccacc
ctaagcaagaaactcacgtcagaggagatagaactcaaactcaaagaagtgttgctggta
ttgaagtatgttcagaataaagatgtgtttatgaggtaccataaagcccacctgaccaga
agactgatcctggacatctcagccgacagcgagatagaagagaacatggtggagtggctc
agggaggtggggatgcctgcagactatgtgaataagctggccaggatgttccaggacatt
aaagtatcggatgatctcaaccaggtcttcaaggagatgcacaaacacaacaagctggct
ttgccagctgacagtgtgaatataaagatcctgaatgcgggggcgtggtcgaggagcagt
gagaaggtgtttgtgtctctgcctactgagctggaggatctgatcccagaggtagaagac
ttctacaagaggaaccacagcgggaggaaactacactggcaccacctcatgtccaatggc
atcatcaccttcaagaacgaaatgggtcattatgacctggaggtcacgacctttcagctg
gctgtcctattcgcctggaaccagcggccgcgggagagaatcagcttcgagaaccttaaa
ttggccaccgagctgcccgatgctgagctacgacgcacactctggtctctggtagcgttc
cctaagctgaagagacaggtgttgtcctatgagccttcagtctcctcccctaaagacttc
acagacagcaccctgttctacgtcaaccaggacttctctctcattaaaaactccaaggtc
cagaaaagaggcaagattaatctgattggtcgactgcagctgaccacggagcgaatgaga
gaggaggagaacgagggcatcgtccagctgagaatattaagaacccaggaggccatcatc
cagattatgaagatgaggaagaggatcagtaatgcccagctacagacagagctggtagag
atcctcaagaacatgttcctgccccagaaaaagatgatcaaggaacagatcgagtggctc
atcgaacacaaatacataaaacgggacgagacggacatcaacacctttatctacatggca
tag

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