Coregonus clupeaformis (lake whitefish): 123484089
Help
Entry
123484089 CDS
T08357
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123484089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
123484089
Spliceosome [BR:
cclu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123484089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
123484089
NCBI-ProteinID:
XP_045069988
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRSSRGNKGAGERNRKRDLKDVFGDEVEVVAGRDVPEAGDGVPVKRKR
VPRFEEVEEPEVLPAPPTESPAMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDQPFASRLLPTPSALSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIGNTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTIYFDGRVNIAPAQRVKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTETNFAAMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHIAVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctgcggccctgggtggagcggaccgtgaag
aaggtgctgggtttctcagagcctactgtcgtcactgcggccctgcactgtgtgggcaag
ggcctggacaagaggaagaccacagaccagctgcgtccattcctggatgaatcggccgga
gggttcgtggagagactatttgaggccctggaggagagccgcagttcccgtggcaacaag
ggtgccggggagaggaaccgcaagagagacctgaaggatgtgtttggtgatgaggtggag
gtggttgcggggcgggacgtcccagaggcaggagacggtgtgccggtgaagaggaaacgt
gtcccccgctttgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctgccatgctcactaagatacagatcaaacagatgatggaggctgccaccagacaaata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagaccagccttttgcctctcgtcttctccccactccctctgccctc
tcctcgggctcggcccagtccatcgctccctcccaggcagctactttcatgaatgatgcc
atcgagaaggctaggaaggctgcagagctgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgggaacactggaggaccacataacctggtggctctg
gccaacctacacgccatggggatagcaccaccgaaggtggcggaggcccgtgagtcaaac
aagcccgcccctctgattctggatgatatgggtcggaccgtggacgccagcggcaacgag
gtggagctaacccaccgcatgcccacactcaaagctaatatccgtgcggtgaagagagag
cagttccgtcagcagttgaaggagaagcctggtgaggacctggagtccactatctacttt
gacgggcgtgttaacatagcacccgcccagcgagtcaagaagggcttcaagttccacgag
cagggacgcttcgagaagatcgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagacagggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgctgggagacgggcaggtgcccatcattgagtggtgggac
tcatacatcctcccctccaacattgacctatccacagagaccaattttgcggcgatggag
ttgtttggagtcacaaacctggtggagcaccctgcccagatcagccccccagtcgacaca
gacaagccaggagtgactctgggagtgtacctgactaagaaggaacagaagaagttgagg
agacagactcgcagggagggacagaaagagctacaggaaaaggtccgactggggctcatg
cccccaccagaacctaaagtgcgtatctctaacctgatgagagtgctgggtacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagctcagatggccaagagacagaag
gcccatgaggaggccaatgcagcccggaagctcacaaccgagcagaggaaagagaagaag
gtgaagaaactcaaagaggacctgagtcttggagttcacatcgcagtctataggatccgt
aacctccacaacccggctaaaaagtttaaggtggaagccaacgccaaccagctgtacctg
accggcactgtggtgctacaccgagacgtcaacatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgagcagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggtc
tgggagggcacagctaaggagcgtaactatggggagatgaagtttaagcagtgtcctaca
gagaacatggccagagaacactttaagaagcatgggacagaacactactgggacctggct
ctgagccagagtgtgctggagagcactgatgactga
DBGET
integrated database retrieval system
