Coregonus clupeaformis (lake whitefish): 123484096
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Entry
123484096 CDS
T08357
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123484096
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
123484096
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
123484096
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
123484096
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
123484096
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123484096
Prokaryotic type
123484096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
123484096
NCBI-ProteinID:
XP_045070003
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MVVTVLLRFPVCRPSVRAVLRSQRHYSKIQASSALSERVRVFESLRERRGQPRTSGTTEQ
ALSVRLADGRTVKGTTGVTTPSLIAQNARVKGALVSRVNGELWELLRPLEADCELQLLGF
DTTEGKQAVWRTGACVVGGVLEGVFGAEVCREGVSESGLYCDHLLENSALSLAELEERCK
EAAGQKLPLSRLELNTQEVTELFQDRALRLQLIEEQMSGPTVTVYRCGDSIGVCNGPLLP
HTGLLKVFKMLQVSPVTLTNPVGSSGVMRVMGVAFPGEREREEWEREQEEARKRDHRRIG
KDQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKTEYRRRGFNEVVTPTLYSTALWERSG
HWEHYSENMFTVTGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHRNELSG
ALGGLTRVRRFCQDDAHIFCTPEQLEEEIIACLEFVRSVYRVFGFSFHCLLSTRPTPCLG
EPALWDHAEQQLERSLQQFGERWQLNPGDGAFYGPKIDIQIKDAIGRQHQCATIQLDFQL
PIRFDLQYVGGDGETHRPVMVHRAVLGSLERMIAILAENFWGKWPLWLSPAQVMIIPVGG
GSESYAQQVVRQFREADFMADVDDDQGATLNKKIRSAQLAQYNYIFVVGEKECVSGTVSV
RTRGGKQLGRRPTEEVLASLTHLRDTRSNLDDF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgaccgtgctgttacggtttcccgtctgtcggccgtcagttcgggcagtgctt
cgctctcagaggcactatagcaagatacaggcgtcctctgctctgtctgagcgtgtgcgg
gtgtttgagtctctcagagagagacggggccagccgaggacaagcggcaccacagaacag
gccctcagcgtccgattggctgatggcaggacggtgaagggcaccacaggagtgaccacg
ccctcactcatcgcccagaacgcacgtgtgaaaggtgctctagtaagcagggtgaatgga
gagctgtgggagctgcttcgccccctggaggctgactgtgaactacagctactgggcttc
gacaccacagagggcaaacaggcagtgtggaggacaggagcgtgtgtagtggggggggtg
ttagagggggtgtttggggcagaggtgtgcagagagggcgtgtcagagtctggcctctac
tgtgaccacctcctggagaacagtgccctgtccctagctgagctggaggagagatgcaag
gaggccgctggccagaagcttcctctctccagactggagctgaacacacaggaagttaca
gagctcttccaggacagagctctgagactccagttgattgaagaacagatgagtggtcct
actgtcacagtgtacaggtgtggcgacagcataggagtctgcaatggtcctctcctccct
cacactggtctcctcaaggtcttcaagatgctgcaggtgtctcccgtaacgttgaccaat
cctgttggctcgtcaggtgtgatgcgtgtgatgggtgtggccttcccaggagagagggag
agggaggagtgggagagggaacaggaggaggcacggaagagagaccacagacgcatcggc
aaggaccaggagctgttcttctttaatgacgtcagtcctggaagctgcttcttcctgcct
aaaggagctcacatctacaacacactcactgactttatcaagactgagtacaggaggcgt
ggcttcaatgaggttgtgacccctactctatacagcactgcattgtgggagcgttcgggt
cactgggaacactacagtgaaaacatgttcactgtgaccggtgacacacacacctacgca
ctcaaacccatgaactgccctgcacactgtctgatgtttgagcagcgtgtaaggtcatgg
agagagctcccgttgcgttgggccgatttcggggctctgcatcggaacgaactgtccggc
gctctgggtggtctcacccgggtccgcaggttctgccaggacgacgcacacatcttctgc
actcctgaacagttggaggaggagatcatagcgtgtttggagtttgtgaggagtgtttat
cgagtgtttggattctccttccactgtctcctctccacccgacctacaccctgcctgggg
gagcctgcactgtgggaccacgctgagcagcagttggagaggagtctgcagcagtttgga
gagcgctggcagctcaacccaggagatggagcgttctacgggccaaagattgacatccag
atcaaggatgccattggtcgacagcaccagtgtgccaccatccaattggacttccagctg
ccaatcagatttgaccttcagtatgtggggggggatggagagacccacagaccagtgatg
gtccacagagctgttctgggatcactggaacgcatgatcgctatattggccgagaatttt
tgggggaaatggcctctgtggttgtctccagcgcaggtcatgattattcctgtaggggga
ggtagtgagtcgtatgcgcaacaggtggtccgacagttccgcgaggccgacttcatggct
gacgtggatgatgaccagggtgccaccttaaataagaagatccgctctgcacagctggcc
cagtacaactacatatttgtggtaggagagaaggagtgtgtgagtgggacagtaagtgtg
agaaccagaggggggaagcagctagggaggagaccgacagaagaggtcctggcatcactc
acacacctacgagacacacggagcaacctggatgacttctaa
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