Coregonus clupeaformis (lake whitefish): 123484386
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Entry
123484386 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cclu04054
]
123484386
Pattern recognition receptors [BR:
cclu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123484386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
PYRIN
Motif
Other DBs
NCBI-GeneID:
123484386
NCBI-ProteinID:
XP_045070650
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
ENIMTFVKNELKMFKRILSPELPEGFESQKQDKEVVDAEDEKQESSAREGALKITLHVLR
KMNQKELADTLEKHERAVILQCELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEG
GTGEVNNEHELRQIETTTRKQARPETAIKCNDIFKPLTGQDKLIRTVLTKGVAGIGKTVS
VQKFILDWAEGKANQDVQFVFSFPFRELNLMKKEKHTFIELLNHFSIETKESRISNYDKY
KVLFIFDGLDECRLPLDFQKNKICCDVTKSTSVDVLLTNLIKGNLLPSALLWITTRPAAA
NKIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCW
ISAIVLEHMLKHKREEMPKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGK
LAFQQLVKGNLIFYEEDLKEAGIDVNEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQE
FLAAVYVFLSFINNNENLMAKPQSMFSYFFALSRDKPEVTFYKSAVDKALQSETGNLDLF
LRFLLGLSLESNQKYLRALLTKTRSSSQSHEETVKYIKEKIRKNPSPERCINLFHCLNEL
NDHSLVEEIQSYLSSGSLSEEELSPAQWSALVFVLLTSEKDLDVFDLKKYSRSEKGLLRL
LPVVKASRAALLSGCGVTEEGCASLVSALKSNPSHLRELDLSNNDLKDSGVKLLSAGLGN
PHCKLETLRLSGCLVTEEGCASLVSALKSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPH
CRLEKLNVEHGGENTMKPGLRKYVCDLTLDLNTVNRFLSLSEENRKVTCRREKQPYPDHP
ERFEDWRQVLCREGLTGRCYWEVEWRGSWADIGVTYKGISRRGWGGDCGLGWNDKSWNLI
CFDNSYSVRHNNKSTTIDVPPSSHRVGVYLDWPAGTLSFYRVSSDTLTHLYTFHSTFTEP
LYPGFWVHDDSSVSL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gagaatattatgacatttgtgaagaacgagctgaagatgttcaagaggattcttagtcca
gaactcccagaaggctttgagagtcagaagcaggataaggaagtggtggatgctgaagat
gagaagcaggagagcagtgccagagagggggctctgaagatcacactgcacgtcctgagg
aaaatgaaccagaaggagcttgctgacacactggagaaacatgagcgtgctgtgattctt
caatgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatcgct
aaacaaggaaacccaacacttctcaataagatctacacagagctctacatcacagagggt
ggaacaggagaggtcaataatgaacatgagctgagacagattgagacaacaaccaggaaa
caagcaagaccagagactgcaatcaaatgtaacgacatcttcaaacccttaaccggacaa
gacaaactcatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtctct
gtgcagaagttcattctggactgggctgaaggtaaagcaaatcaggatgtccaatttgta
ttttcattcccttttcgggagctgaatttgatgaaaaaggaaaaacacactttcattgaa
cttctcaatcacttctcaatcgaaaccaaagaatcaagaatctccaactacgacaagtac
aaagttctgttcatctttgatggtctggatgagtgccgactgcccctagacttccagaag
aacaagatctgttgtgacgtcacaaagtcaacctcagtggatgttctgctgacaaatctc
atcaagggaaatctgcttccctctgctctcctctggataactacccgacctgcagcagcc
aataagatcccttcagggtgtgttgaccaggtgacagaggtacgagggttcaatgaccca
cagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcagaatcatc
tcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgttgg
atttctgcaatagtccttgaacacatgctgaaacataagagagaagagatgcccaagact
ctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaatgaaaagtat
cttgggaaagaagagacaggtccacactggaataaagagagcattctgtcactgggaaaa
ctggcttttcaacagcttgtgaagggcaatctgattttctatgaagaagacctaaaagag
gctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacagctctttaaa
gaggaatgtgggctgtaccaggacaaggtgtactgcttcgtgcatctgagcattcaggag
tttctggctgctgtatatgtgttcctctcattcatcaacaacaatgagaatctaatggcc
aaacctcaatcaatgttcagctacttttttgcgctgtcaagagacaagcctgaagttact
ttctacaagagtgctgtggataaagccttacaaagtgagacaggaaacctggaccttttc
ctccgcttccttctgggcctctcactggagtccaatcagaagtacttacgagctctactg
acaaagacaagaagcagctcacagagccatgaagaaacagtcaagtacatcaaggagaag
atcaggaagaatccctctccagagaggtgcatcaatctgttccactgtctgaatgaactg
aatgaccattctctagtggaggagatccaaagctacctgagctcaggaagtctctcagaa
gaagaactgtcacctgcacagtggtcagctctggtctttgtgttgctgacttcagaaaaa
gatctggatgtgtttgacctgaagaaatactccagatcagagaaaggtcttctgaggctg
ctgccagtggtcaaagcctccagagctgctctgctgtcaggctgtggagtcacagaggaa
ggctgtgcttctctggtctcagctctgaagtcaaacccctcacacctgagagagctggat
ctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgctggactggggaat
ccccactgtaaactggagactctgaggctgtcaggctgtctagtcacagaggaaggctgt
gcttctctggtctcagctctgaagtcaaacccctcacacctgagagagctggacctgagc
tacaatcacccaggagactcaggagtcagactgctctctgctggactggaggatccacac
tgcagactggagaaactcaatgtggaacatggtggagagaacacaatgaaacctggactt
agaaaatatgtctgtgatctcacactggacctaaacacagtaaacagattcctctctctg
tctgaggagaacagaaaggtgacatgtaggagagagaagcagccgtatcctgatcaccca
gagagatttgaggactggagacaggtgctgtgtagagagggtctgactgggcgctgttac
tgggaggtagagtggagggggagttgggctgatataggagtgacatataaaggaatcagt
aggagaggatggggtggtgactgtgggcttggatggaatgacaagtcctggaatctgatc
tgctttgacaacagttactctgtcaggcacaataataagtccactaccatagacgtccct
cctagctcccacagagtaggagtgtatctggactggccagccggcactctgtccttctac
agagtctcctctgacacactgacccacctgtacacattccactccacattcactgagccc
ctctatccagggttttgggttcatgatgactcctcagtgtctctgtaa
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