Coregonus clupeaformis (lake whitefish): 123484468
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Entry
123484468 CDS
T08357
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123484468
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123484468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
123484468
NCBI-ProteinID:
XP_045070783
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MPSATVGNNAFQASSPELGSGTQSEAMKQVLQVIDKKVRNMEKKKGKLDDYQAKKNKGEL
LNQDQLDALTKFQEVTNNLDFARELQKSFLSLGQEIQKAVKKSARREQLQREETEQRRLK
TVLELQFLLDRLGDEQTRQDLKQPAAGSPLLTDADLTALDNFYKLVGPERDHDVRLTDQY
EEASLHLWELLEGRDQAVAGTTYKALKETLDKVLLSGYFDRAQTHQNGVCEEEEVVEEEE
EEQSVAHESSGSGEQPAEPEETVTEEYTEAVEVEATEFVNRQFIPETTYSRTGNDQVEEW
TAEAQVVNALQHQPPPQMAPEPHTVNPVSHTPDPVVRKQVVQDLMAQMQGTYNFMQDSML
EFDGHALDPAIVLAQPMKPVQSVDLQQMGQFHSESRLPQPSSIPESTQVPMVSPTPDAYS
STPPLYQPSHTAEPQPQTDSTDHIQASTSLSSEQSPAQSSLPSAFPPVSTPHSGGINVNA
APFQSMQAVFNLNAPVPPTNEADSLKQNQFPSSYGQGFSSQAEHSVEQPDIQQDTLQSGG
FHTQDQVISSAAGHQVQSSQGPGFGRQGQSFYNSRGAVPRGGPRNPRGMINAYRGSSNGF
RGGYDGYRPPFSNTPNNGYGQQAQFSTAPRDYSNSTYQREGYQPGYKRGAAQGPRGCSRA
VAGRGGLFKPSRGMVTQMAAHQAN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcaacagttggcaacaatgcttttcaggcctccagcccagagttgggttct
gggacccagtctgaggccatgaagcaggtcctgcaggtgatcgacaagaaggtccgcaac
atggaaaagaaaaagggcaagctggatgactaccaggccaagaagaataaaggagaactg
ttgaaccaggatcagctggatgccttgactaagttccaggaagtgaccaacaacctggat
tttgctcgggagttgcagaagagcttcctgtctttggggcaagagatccaaaaggcagtg
aagaagtctgcccgtagggagcagctgcagcgggaggagacggagcagaggcggctgaag
actgttctggagctgcagttcctgctggaccggctgggggacgagcagacgaggcaggac
ctgaaacagcccgccgcaggctcccccctgctcaccgatgctgacctcaccgcactggac
aatttctacaagctggtgggccctgaacgggaccatgacgtcaggttgactgaccagtat
gaggaggcctccctacacctatgggaactgctagagggcagagaccaggctgtggcagga
accacatacaaggcactgaaggagaccctggacaaggtgctgctgagtggctattttgac
agagcacaaacgcatcagaatggagtgtgtgaggaggaggaggtggtggaagaagaagag
gaggagcagtctgtggcgcatgagtcgtctgggagtggggagcagcctgcagaaccagaa
gaaacagttactgaagaatacacagaggccgttgaagtagaagccacggagtttgtaaac
agacagttcattccagaaaccacatacagcaggactggcaacgaccaagtagaggagtgg
acggcagaggcccaggtggtcaacgccctccagcaccagcctcctccccagatggccccc
gagccccacactgtgaacccagtctcccacacgcctgaccccgtggtcaggaagcaggtc
gtacaggacctcatggcccagatgcagggaacctataacttcatgcaggactccatgttg
gaatttgatggccatgccctggacccagccatcgtgttggcccagcccatgaagcctgtg
cagagcgtggacctgcagcagatgggtcagtttcattcagaatccagacttcctcaacca
agctcaattcctgaatctacacaagtccccatggtatcccccacacctgatgcctactcc
tccacaccacccctctaccagccctcccacacagcagagccccagccacagacagacagc
accgaccacatccaggcctcgacgtctctgtcgtctgagcagtcccccgcccagtcctcc
ttgccctctgccttcccgcctgtctccaccccccacagcggcggcatcaatgtcaacgca
gcaccattccagtccatgcaagcggtgttcaacctcaacgcccccgtgccccccactaac
gaagcagacagtctgaagcagaaccaattccccagcagctacggccagggcttcagcagc
caggcggagcactccgtggagcagcctgacatccagcaggacacgctacagtctggaggc
ttccacacccaagaccaagtgatatcgtcggcagcgggccaccaggtgcagtcgtcccag
gggccaggctttgggcggcaaggccagtccttctacaacagcaggggggccgtgcctcgc
ggaggccccaggaacccccggggcatgatcaatgcatacagaggatcctctaacggtttc
agaggaggatatgatggctatcgccctcccttctcgaacactccaaacaatggttatggg
caacaggcccagttcagcacggctccccgggactactccaacagcacctatcagcgggag
ggatatcagccaggctacaagcggggagcagcccagggacctcggggttgctctcgagcg
gttgcaggccgggggggactgtttaagcccagccgagggatggtgacccaaatggctgca
catcaagccaactag
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