Coregonus clupeaformis (lake whitefish): 123484740
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Entry
123484740 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
123484740
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
123484740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
TSP_1
CarboxypepD_reg
CarbopepD_reg_2
ig
TSP1_spondin
TSP1_CFP_C
V-set
GlgB_N
Motif
Other DBs
NCBI-GeneID:
123484740
NCBI-ProteinID:
XP_045071304
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MCCLSTWALLLALGVTTTAQGTWRRDSSRVARQNNPAVYNSEDDYEWTTWFNVDHPGGRG
DYEQLDAIRFYYRARVCDAPRALEARTTDWIPARNTGEKIHADPTLGFWCANAEQAPGRN
CSNYAVRFLCPKGQSGNTGSEGSQDAWGPWSDWSHCSAKCGQVAMQVRSRKCQSQPKQWD
KQCSGPTVEGRACKGPECPGTGCTLHCEMGRMNAECDACMCQDHIVLGSVRSAGGLPAPG
ATILRSAPAPNXLTLTDHNGHFRIPGICPDGNATLTVQLRNHAPHTVIVPHSTERTSVLS
IMLNRAEKLHVVKNPENKVRREGQTAALCCKVGGSPEPEEYQWFHNGSLLDRKQLNYDST
LVLRNLSMEQTGEYYCRASNQAGAIKSKPAIVTVLGKDQPSCNPKPESYLIRLPHDCYQN
STGSLYYDVGKCLSGTCAGQLDNGIRCKDSVAYCCGVAKMEEKQLKCQGYELTTMVVTEC
GCQKCVETKAIVRGRAVAADTGEPMRFGHVYINGARVSRTGYQGTFSIQVPHDTERLVMT
FVDNMDKFVNTTKVLPFNTKGGAVYHEIKLLRKKEPVTISSTELNTLQLGEVEGQDPIAE
IQIPPNSFYKQSGEVFVGNVKASITFLDARDVSTAAAAQSDLNFVGDEGDTLPLRTYGMF
SVDFRDEEAGEPLNAGEVKVKMDSTQVKMPEHLDTMKLWSLNPDTGMWEEEGSFQMEKKQ
RGKREERTFLIGNMEIRERRLFNLDVPENRRCYIKVRGFRSDRFMPSEQVEGVVVTLINM
EPTAGYSSNPRAWGRFDSVITGPNGACLPAFCDDQKADAYSAHVMANMGGEELEAVPSAP
KFNPNIIGVPQPYLGKLNYRRSDHNDPRLKKTAFSINVAKPSPNTAEELNGPVYSFDQLK
ECEEAPFTAGHFRFTRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYVKVKI
NGPHEINVRSRNQGGTHPKTVGQLYGLRDTRSIRDMDQSTVSAVCLEFKCSGMLYDQDRV
DRTLMKVIPQGSCKRDNVNSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVT
DQDPRTAKEIALGRCFDGTSDGTSRVMKSNEGVALTFTCGNREVTRQSVFQAPQNSPGQS
VASAVRGGRGRRQRAGANALRNSRRRSTRNPAATRTQSTSG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcctgtcaacatgggctctcctcctagctctgggagtcaccactacggcacaa
ggaacatggagaagagacagttcgagagttgcgagacaaaacaaccctgcagtgtacaac
tctgaagatgactatgagtggaccacttggttcaacgtggatcaccctggaggtcgagga
gactatgagcagttggacgctatccgtttctactaccgcgcgcgggtgtgtgacgccccc
cgggccctggaggctcgcaccactgactggatccccgctcgcaacacgggggagaagatc
cacgcagaccctaccctgggcttctggtgcgccaacgctgagcaggcccctggtcgcaac
tgctccaactacgctgtgcgcttcctgtgccccaaaggtcagtctggcaacactgggtca
gaaggctctcaggatgcctggggtccttggtcagactggagccattgctctgccaagtgt
ggccaggtggcaatgcaggtgcgctccaggaaatgccagtcccaacctaagcagtgggat
aagcagtgcagcggacctacggtggagggtagagcctgcaaaggacctgaatgccctggg
actggttgcacactgcactgtgagatgggtaggatgaatgcggagtgtgacgcctgtatg
tgtcaggaccacattgtactgggctctgtccgcagtgctggaggtctccctgccccaggg
gccaccatcctccgctcggccccagctccaaacnntctcaccctcaccgatcacaatgga
cacttccgcatcccagggatctgtcccgacggcaatgccacactgaccgtccagctgcgg
aaccacgcccctcacactgtcatcgtgccccacagcaccgaacgcacctctgtcctcagt
atcatgctgaacagagcagagaagctccatgtggtgaagaaccctgagaacaaggtcaga
agagagggccagacagctgctctctgctgcaaagtgggtggatcaccagagccagaagag
taccagtggtttcacaacggcagcctgctggacaggaagcagctgaactatgacagcacg
ctggtcttaagaaacctgagcatggagcagactggggagtactactgcagagccagcaac
caggctggggccatcaagtccaaaccagccatagtcacagtcttaggtaaagatcaacct
tcatgtaacccgaaacccgaatcctaccttattcgcctacctcatgactgctaccaaaac
agcaccggctctctctattacgacgtaggaaagtgcctctcaggaacctgtgcaggacag
ctggacaatggaatcaggtgcaaggactcagtggcatactgctgtggggtggcaaagatg
gaggagaaacaactaaaatgccagggctatgagctcaccaccatggtggtgaccgagtgt
ggctgccagaaatgtgtggagaccaaagccattgtgcgtgggcgggctgtggccgcagac
actggagagcccatgagatttggtcacgtctacataaatggagccagagtcagccgcaca
ggctaccaaggcaccttctccatccaggtcccccatgacactgagaggctggtgatgacc
tttgtggacaacatggataagttcgtcaacaccaccaaggttcttccattcaacaccaaa
gggggcgccgtctaccatgagatcaagcttttgaggaagaaggaaccagtgaccatcagc
tcaacagagctcaacactcttcagctgggagaggtggagggccaggatcctattgctgag
atccagatcccacccaactccttctacaagcagagtggagaagtatttgtgggtaatgtg
aaggctagcatcacttttctggatgctagagacgtgtccacagcagcagccgcacagagt
gacctcaacttcgtaggagatgagggagacaccttgcccctgagaacctacggtatgttc
tcagttgacttcagggatgaggaggccggagaaccactgaacgccggagaggtgaaggtg
aaaatggattcaacacaggtgaaaatgcctgagcacctggacaccatgaagctgtggtcc
ttgaaccccgacacgggcatgtgggaggaggaggggagcttccagatggagaagaagcaa
cgtggtaaaagggaggagaggaccttcctcattgggaacatggagatcagagagaggagg
ctgtttaacctggacgtcccagagaacaggaggtgttacatcaaggtgcgaggcttccgc
agcgatcgcttcatgcccagcgagcaggtagagggagtggtggtgaccttgatcaacatg
gaacccactgcaggttactcctccaaccctcgtgcttggggacgctttgacagcgtcatc
actggccccaatggtgcctgtctgcctgccttctgcgacgaccagaaagctgacgcatat
tctgcccacgtcatggccaacatgggaggagaagaactcgaggctgtcccgtctgctccc
aaattcaaccccaacatcattggagtccctcagccatacctgggcaagctgaactacaga
cggtcagaccacaatgaccccaggttaaagaagacagccttcagcatcaatgtggccaag
cccagcccaaacacagctgaagagctcaatggacctgtgtactcatttgaccaactgaaa
gagtgtgaggaagccccatttactgcaggccacttccgcttcaccagagtggagggagat
cgctacgactacaacacagtgcctttcaacgaagacgatcctatgagctggacagaagac
tacctgagctggtggcccaagcccatggagtaccgagcctgctatgtcaaggtcaagatc
aatggtccccatgagatcaacgtgcgctcccgcaaccagggcggcactcaccccaagacc
gttggccaactgtatggcctccgcgacacccgcagcatccgcgacatggaccagtccacc
gtctctgctgtgtgcctggagttcaagtgcagtggcatgctctacgaccaggaccgagtg
gaccgcactctgatgaaggtgattcctcagggcagctgtaagagggacaatgttaactcc
atgcttcaagagtacctggttaatcacctgcctctagccgtcaacaacgacaccaatgag
ttcacaatgctggcaccactggaccctctgggccacaactatggcatctacacagtgaca
gaccaggacccccgcacagctaaagagatagcactgggacgctgctttgatggcacctct
gatggcacttcccgtgtcatgaagagcaacgagggagtggcacttacctttacctgtggc
aaccgtgaggtgacccgtcaaagcgtgttccaggctccgcagaactcccccgggcagtct
gtggcgagcgcagtgaggggtggccgaggcaggaggcagagagcaggagccaacgcactc
cgcaacagccgtagacgcagtactcggaatcccgctgccacacgcacccagagcacctca
ggttaa
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integrated database retrieval system
