KEGG   Coregonus clupeaformis (lake whitefish): 123484912
Entry
123484912         CDS       T08357                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123484912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    123484912
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     123484912
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 123484912
NCBI-ProteinID: XP_045071623
LinkDB
Position
Unknown
AA seq 635 aa
MPEIKLKHVVSCSTEDNTHKADNLLSSDTYRKWKAARPGEKQTSVIIQFEKEEQVHSIDI
GNEGSAFIEVLVGHSTSVKDQDYEVLLVTSSFMSPTESRNGTNTNRVRFFGPNQLVKAQA
QEKWDRVKIVCSQPYNKSIAYGVAFVKFHSPPDKSDPPTTTPPKLTKLGQFRMKDESPLA
GPSLQPGSLFFNRESTSKPSPALKISPQTEKLSYAAATLQSGSGSGHSTAPPSSNSPPPQ
APVKRKFEFSKERQSAPTPPPSKKPSPMGSPERGTTTPKPKAKSSTATTPSPSTAKASPA
QKTPDIKKKESLSKPEAKTRPKPSKAQSSSSEAPVSLNKIMEGVVFVLSGFQNPFRGDLR
DKALAMGAKYRSDWTPDATHLICAFSNTPKYSQVKSAGGIIVRKEWVLDCHKRKQKISFK
RYLMDGAESSSEGSDEEEDEEREEEKERRTPQKSREEERQPTPRKAPIKEEEDDLYGGST
DADEPEDESGMDTEDELKRVESASRQKKGEKERREVKEEDPFGGSTDENTDAEAEEDKPI
PELPDFLTGKRFFLYGKFPNNDRRLLLRYIMAFNGAVEDYMSEKVQFVVTSEGWHDSFED
ALMENGNLSFVKPTWIFAINDRQKMLPYQPYTVVP
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgccggagataaaactcaagcacgtcgtgtcttgcagcaccgaagacaatactcacaag
gctgacaacctgctgagctctgacacatacaggaaatggaaagcagcaaggccaggggag
aaacaaacctcagtcattatacagtttgagaaagaagagcaggtgcacagcatagacata
ggaaatgaagggtctgcttttatcgaggtgctggtgggacactcaacctctgtcaaagac
caggactatgaggttctgctggtcacgtcctccttcatgtcccccacggagagccgtaac
ggcaccaacaccaaccgggtgcgcttctttggccctaaccagctggtgaaggctcaagcc
caggagaagtgggaccgcgtgaagattgtgtgtagccagccgtacaacaagagcatagca
tacggagtggcctttgtgaagttccattcaccaccagacaaaagtgatccaccaaccaca
acacccccgaagttgaccaagctgggccagtttcggatgaaggatgagtcccccttggct
ggccccagtctacagccaggcagcctcttcttcaacagagagagcacctccaaacccagc
ccagcgctcaagatttcgccacagactgagaagctcagctatgcagctgccaccctgcag
tctgggtctgggtctggtcactcaacagccccaccatcctccaactctcccccaccacag
gcaccagtgaagaggaagtttgagttcagtaaagagcgccagtctgcccccactccgccc
ccctcaaagaaacccagccccatgggctcccctgaacggggcactaccacccccaaaccc
aaggccaaatccagcacagccactactcccagccccagcactgccaaagcctcccctgcc
cagaaaaccccagacatcaagaagaaggagagcctgtccaagccagaagccaagaccaga
cccaagccctccaaagcccagtccagctcctccgaggcccccgtctccctcaacaagatc
atggagggggtggtgtttgttctgagcggcttccagaaccccttccggggggacctgagg
gacaaggccttggccatgggggccaagtaccgctccgactggacccccgacgccacacac
ctcatctgtgccttctccaacacccccaagtacagccaggtgaagtcagcagggggcatc
atcgtccggaaggagtgggtgctagactgccacaagaggaagcagaagatctccttcaaa
cggtacctgatggacggagcggagtccagctcggaggggagcgacgaagaggaggatgag
gagagggaggaggaaaaagagaggaggactccacaaaagagtagggaagaagaacggcaa
cccactcccagaaaggcccccatcaaggaagaggaggatgatctgtatggtggctccaca
gacgcagatgaaccagaagatgagtctggcatggacacagaggatgagctgaaaagggtg
gagagcgcgagtcggcagaagaaaggagagaaggagagaagggaagtgaaggaggaggac
cctttcgggggatcgacggacgagaacacagatgctgaggccgaggaggacaagcccatc
cctgagctaccagatttcctaactggaaagcgattcttcctctacggcaagttccccaac
aatgacagacgcctactcctgcggtacatcatggccttcaatggggcggtggaggactac
atgagtgagaaggtccagtttgtcgtcactagcgaaggatggcacgactcctttgaagac
gcgctgatggagaatggtaatttaagctttgtcaaacccacatggatttttgccatcaac
gatcggcagaagatgctgccatatcagccctacactgttgtcccttga

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