Coregonus clupeaformis (lake whitefish): 123484955
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Entry
123484955 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123484955
04082 Neuroactive ligand signaling
123484955
04519 Cadherin signaling
123484955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
123484955
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
123484955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
123484955
NCBI-ProteinID:
XP_045071708
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MHRFSTMKHVWISVLLVCITWQVSLGQTTAEALKEAEANDNITIFTRILDGLLDGYDNRL
RPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNNLL
ASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDA
HACPLKFGSYAYPVSEVVYLWQTGAAKSVVVAEDGSRLNQYHLIGQTAGSEDIYTSRGQY
TVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLS
ISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQHPKK
RDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSETKVLDPKKTYNSVSK
IDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttttctacaatgaaacatgtgtggatctctgtcttgctggtgtgcataact
tggcaagtgagtcttggccagaccacagcagaggcattgaaagaggcagaggctaatgac
aacatcaccatcttcacacggatactggacggactcctggacggctacgacaacagactc
agaccaggacttggagaaaaggtcacggagatcaaaaccaatatatttgtcacaagcttt
ggcccagtttcagatactgaaatggaatacaccatcgacgtgtttttccgacaaagctgg
aaagatgagcgcctttgtttcaaaggacccatggagatgctgcctctgaacaacctcctg
gccagtaacatctggaccccagacaccttcttcctcaacgggaaaaagtctatcgcccac
aacatgaccacacccaacaagctactgagactgaaagatgacgggacgctgctctacaca
atgaggttaaccatatcagcggagtgtcccatgcagttggaggacttcccaatggatgct
catgcttgccctttgaagtttggaagctatgcctatccagtctctgaggtggtgtacctc
tggcaaactggtgctgccaagtctgtagtggtggcagaagacggatcccgtctcaaccag
taccacctgattggccagaccgcaggctctgaggacatctacaccagtcgaggacagtac
acagtcatgatgtgtcacttctacctgaagaggaagattggttactttgtcattcagacc
tacatgccctgcttcatgaccgtgatcctgtcccaggtgtccttctggctcaaccgtgaa
tctgtacctgccaggaccgtctttggtgtcactacagtgctgactatgactactctcagt
atcagcgctcgcaactcgctgcctaaggtggcctacgccacagccatggattggttcatc
gctgtgtgctatgcgttcgtgttctccgcgcttatcgagtttgccaccgtcaactatttc
accaagaggagctgggcgtgggatggcaagaaggccatggaggctcagcacccaaagaaa
agggaccctatggtgctttctaagaagcccaacaacgtctgtacagcaggagttaactac
acccccaacatcactaaggatatctctatctccaccatctccaacagcacctccatacaa
ctaaggtcatccgaaaccaaagtcctggaccccaagaaaacctacaacagcgtgagtaaa
atcgacaaaatgtcccggatagttttccctgtcctctttggaacctttaacctagtgtac
tgggctacttacctcaacagagaacctgtcatcaaaggagtcaacatattggctccaaca
tag
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