Coregonus clupeaformis (lake whitefish): 123484960
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Entry
123484960 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 1-like
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
123484960
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123484960
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: TKL group
LRRK family
123484960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ank_2
Ank
LRR_14
Ank_3
Ras
Ank_4
Arf
Gtr1_RagA
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
123484960
NCBI-ProteinID:
XP_045071714
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MSYWSVGLSKATGDTQSNNMEDQEKQDGEQDGSLAVEDMGAKVSAMGSGGASSLGPSPTL
ENIQAAYGEGEGRKARELIQQACCVECSAASPRLEGLRLLCVATQHGDAESVSYLLHEAR
VPLPLEPSEGNPAVLAAHYGHVSLVRELLDSVPGPCVHRDLLNWMLVSACQQGHLEVVRM
LVQGYHADAEDCAIHNEEFAVITGLPLYAAARAGNEDIASFLLQNGAGFSSYTLMDYPAF
SRLLLEQRLVEEADTHTGPAGEKLLCGRWSGLKLPWLELDWFMDVSSRISHLDLSCNSLS
TLPSVVPWGLIQLQTLDLSNNLFKELPTAQSSQEIICSRLRQVNLSQNELTSLPSGLLHL
TRVQSSPLLRTSSPPLFDIPNGTNWIGLRKLEELDVSDNCLTSLPSAVLHSFKSLTSLKV
CRNRLTSFPDPWACPLKHCRASSNAIESLPNTISIFWRTQLQEVDFSDNVIKELPSYIFE
LEALVSLRLCKNQISTLPAPNKWKCSLLRTLDLSRNQLGKPEEGPKTRKLAFLTTWHRRD
PDPVCPIEFPVILRDTLEVLSLNDNQLECVPQSVCGLRNLTELYLSNNPGIRELPAELGQ
LSNLWQLDIEDLNITNVPQDIRKEGPASVLSFLRAHLRKAEPCKLLKLLVIGPPRQGKTA
LLEVLQTGRTSPFSPAERNISTATWELDRPNGVKASTDSVAFNVWDIGGPANMSTVNQCF
FTDKALYVVIWNLALGEEAVANLQSWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERVAT
LRAYILALSRSPSGARASGYPDITWKHLHEVSCKTQEGLDGLRRLIFQVACYMKDNSSSS
ASGHKLVGRLIPKSYLTLQQAVLGERGRRDAEDEVQYLTDAQLDLVIEQNPGSDIRDYED
LQTAISFLIETGTLLHFPDTSHGLCTLYFLCPVWLSECLERIIHLKSSRSVAWNGXIRAE
DLRMLLVGTGFTQQTEEQYFQFLAKFEIALPVASDSYLLPHLLPPKPAMDIHGFRQETAN
TIQRLFKMSFVPAGFWERFIARMLISLTEMDLQSFEPKKNAKSERRRTTVIYNFAGTGSQ
QRNRCSTFRVRRSKTIYWREGLLVTFDGGYLSVESTDVNWKRKKSGGIKIICQSETRDFS
AMAFVTDHVNSLIEQWFPALTASESDGTRLIEQYSPCPQCSSMSRQNQGPGSLGEPPTRG
TAAGRRGGEGREKVGGRGEHFFNMEDCVIAAMDQDYIVCPQHPDQPVPLQELVPELFMTD
FPSRLFLEKAQLECSEEESDILGQGGSGAVIYRACYRGQPVAIKRFHFKKCRQQTISSAD
TMMKHFQSMDACRSFSEFRQEASMLHSLQHPCIVALVGISIHPLCFALQLAPLGSLNTVL
SPSPSGSRYMPLGHMLTFRAAYQIXSGLAYLHRKNIIFCDLKSDNILVWSLEVCDLVNIK
LSDYGISRQSFHEGALGVEGTPGYQAPEIRPGIVYDEKVDMFSYGMVVYELLSGCRPALG
QHQLQIAKKLSKGIRPALGSPEEVQFHCLHGLMIECWDTKPEKRPLAMQCVRQMQEPSFP
CLRYLLSCDTHSQLFLSHLQGHSAVFWDGDKDDRNYSVVNVEKGQVEVKRMPCPGSRLSC
QMKMDNTLWTATEEQEVFIYSLKEMCPLSQPQKQLSCPAIVTCLFPVPARDQTQARVFMG
MSDGLVAVYSLVDDMPVEGETYLCSHTLNTTMFGMEDSDPRQRPYPVRSMVLVHSGSQLW
YSHGPGLLVINCRTLQAVRRLEPYDPPSSIQALASASVCQGXEAVWTLDDHTNTLQLYHA
ATYQLCATYSCGDANPLRDVFTVQRPAGVTMDTTP
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactggtctgtaggcctctccaaggccactggagacacacagagcaacaacatg
gaggaccaagagaaacaagatggtgaacaagatggttctttggcggtggaggacatggga
gccaaggtgtctgcgatgggcagcggtggagcctcctctctgggtccgtctccaaccctg
gagaacatccaggcagcgtacggggaaggggagggcaggaaggcccgggagctgatccag
caagcctgctgtgtggagtgtagcgcggctagtcctcggctggaggggctgcgtctcctg
tgtgtggccacccagcatggtgatgcggagagtgtaagttacctcctccatgaggcccgt
gtgcccctgcccctggagccgtcggagggaaaccccgccgtccttgctgcccactatgga
catgtcagcctggtcagagagctgctcgactcagtaccaggtccgtgtgtccacagagat
ctgctgaactggatgttggtgtcggcgtgccaacagggtcacctggaggtggttagaatg
ttggtgcagggttaccatgctgacgctgaggactgtgccatccacaacgaggagtttgct
gtcatcacggggctgcctctctatgctgctgcacgcgcaggtaatgaggacatagctagt
ttcctgctgcagaatggtgctgggttctcctcctacaccctgatggattatcctgccttc
agcagactgctccttgaacaacgactggtagaagaagcagacacacacacaggaccagca
ggagaaaagctactatgtggccgttggtcaggtctgaagctgccgtggttggagctggac
tggttcatggacgtgtcgtcccgtatttcccacctggacctgtcctgtaacagcctcagc
accctgccctccgtggttccctgggggctcatacagctccagaccctagacctctccaac
aacctgttcaaagagctgcccacagcacaaagctcacaggagatcatctgctcaagactt
cgccaggtgaatctgtctcagaatgagttgaccagcctgccgtccggactgctccatctc
accagagtccaaagctctccgctgttaagaacaagctcacctcccctatttgacattcct
aatggtactaactggataggtctgcgtaagctggaggagctggatgtgtctgataactgt
ctgaccagtcttccttctgccgttctgcactctttcaaatccctcacgtccctcaaagtc
tgccggaacagactcaccagcttccctgacccctgggcctgccctctgaagcactgtcga
gcctcatccaacgccatcgagagtcttcccaataccatctccatcttctggagaactcag
ctgcaggaggtggatttctcggacaacgtcatcaaggagctgccctcctatatattcgag
ctggaggccctggtctctctcagactgtgtaagaatcagatctccactctcccggcaccc
aacaagtggaaatgctctctgctcagaacccttgacctctccaggaaccagctgggcaag
cctgaggagggacccaaaaccaggaagctggccttcctgaccacatggcaccgaagagac
cctgacccagtatgcccaatcgagtttccagtaattttgcgggatacgttggaagtgctt
tccttgaacgacaaccagctggagtgtgtgccccagtccgtgtgtggcctgagaaacctc
acggagctctacctctccaataatccaggtattcgagagcttccagctgagttggggcag
ctctctaacctgtggcagttggacattgaggacctcaacatcactaatgttccccaggac
atcaggaaagaaggtccagcatcagtgttgtcctttctccgagcccacctacggaaggcg
gagccctgtaagctgctgaaactgcttgtgattggtcctcctcggcagggaaagacggcc
ctcctggaggtgttacagacgggcaggacctcccctttctcccctgcagaacgaaacatc
agcacagctacttgggaactggacagacccaatggtgttaaagctagcacggactctgtg
gcgttcaacgtgtgggacatcggcggtccggccaacatgtccacggtcaaccagtgtttc
ttcacggacaaggccctgtacgtagtcatctggaacctagctctgggagaggaggctgta
gccaatctgcagtcctggctgcttaacattgaggcgcgtgcccctaactctgcggtggtg
gtggtgggtacccacctggacctgatcgacaccaagttccgtacagagcgggtggccaca
ctgagggcctacatcctggcactcagcaggtctccatcaggcgccagggccagtggctac
ccagacatcacctggaaacacctgcatgaggtatcgtgtaagacccaggagggtctggat
ggtctgaggaggttgatcttccaggtggcctgctacatgaaggacaacagcagtagttca
gctagcggacacaagctggtgggcagactgatcccaaagagctacctgacgctgcaacaa
gcggtgctaggtgagcgggggcggcgggacgcagaagacgaggtccagtacctgacagac
gcacagctggacctcgtcatagagcagaacccaggaagtgacatcagagactacgaggac
ctgcagaccgccataagcttcctgatcgagacaggcaccctactccacttcccagacacc
agtcacggcctgtgtaccctctacttcctctgtcccgtgtggctgtcggagtgtctggag
cggatcatccacctgaagagctcccgatcggtggcctggaacgggntgatccgagcggag
gacctccgcatgctcctggtgggaacgggcttcacccagcagacggaggagcagtacttc
cagtttctggccaagtttgagattgctctgcctgtggccagcgatagttacctcctcccc
cacctccttcctcctaaacctgctatggacatccacggcttccgccaagagaccgccaac
accatccagcggctcttcaagatgagcttcgtgccggcgggattctgggaacgtttcatc
gcccgcatgctcatcagcctcacagagatggacctccagtcctttgagcctaagaagaat
gctaagagcgaacggaggaggaccacggtgatctacaattttgcggggacaggcagccaa
cagaggaaccgctgtagcaccttcagagtccgccgcagtaagaccatctactggagagag
ggactactggtcaccttcgacggagggtatctaagtgtggaatcgactgatgtcaactgg
aagaggaagaaaagcggaggcatcaagatcatttgtcaatcagagaccagggatttttca
gccatggccttcgttacggatcacgtcaactccctcatcgaacagtggttccctgcactg
acggccagtgagagtgatgggacccggttgattgagcagtactccccctgtccccagtgt
tcctccatgagcagacagaaccaggggcctgggagtctgggagaacccccaaccaggggg
actgcagctggaagaagaggaggagaaggcagagaaaaggttggtggaagaggagagcac
ttcttcaacatggaggactgtgtgatcgctgccatggaccaggactacatagtgtgtccc
cagcaccccgaccagcctgtcccccttcaggagctggtcccagagcttttcatgaccgac
ttcccctcacggttgtttctagagaaggcccagttggagtgtagtgaggaggagagtgat
atcctgggccaggggggcagtggagctgtcatctacagagcctgttaccgcggccaacca
gtcgccatcaaacgctttcacttcaagaagtgcaggcagcagaccatcagcagtgcagac
accatgatgaagcacttccagtccatggacgcgtgccggagcttctcagagttccgccag
gaggccagcatgctccactccctgcagcacccgtgcatcgtggccctggtgggaatcagt
atccacccgctctgcttcgccctgcagctggctcccctgggcagcctcaacactgtgctt
tctccctccccatcaggctccaggtacatgcccctgggtcacatgctcaccttcagggca
gcctatcagatcngcagcgggctggcctacctgcacaggaagaacataatcttctgtgac
ctcaagtcagacaacatcctggtgtggtccctggaggtgtgtgacctggtgaatatcaag
ctgtcggactacggcatctcgcgccagtccttccacgagggggcactgggggtggagggc
acgccgggataccaggcccccgagatacgcccaggcatcgtttatgatgagaaggtggat
atgttctcgtatgggatggttgtgtatgagttgctgtcaggttgtaggcctgcgttgggc
cagcaccagctccagatagctaagaagctgtctaaagggatccgtccggccctggggagc
ccagaggaagtccagttccactgtctgcacggcctgatgatcgagtgctgggacactaag
cctgagaagagacccctggccatgcagtgtgtgaggcagatgcaggagcccagtttcccg
tgtctgaggtacctgctgtcctgtgacacacactcccagctcttcctgtcccacctgcag
ggacacagcgctgtcttctgggacggggacaaggacgacaggaactacagtgtggtgaac
gtagagaagggtcaggtagaggtgaagaggatgccgtgtccaggatccaggctgagctgt
cagatgaagatggacaacaccttatggaccgccacagaggagcaggaagtgttcatctac
agtctaaaggagatgtgtccactgagccagccccagaaacagctctcctgtcctgctata
gtcacctgtctgttccccgtgcccgccagagaccagacccaggcgcgtgtcttcatgggg
atgtcagacggtctggtggcagtgtactccctggtggatgacatgcctgtagaaggagag
acctatctgtgttctcacaccctcaatacgaccatgtttgggatggaggactctgaccca
agacagagaccctacccagtcaggagcatggtcctggtccacagtggctcccagctgtgg
tactcccatggtccaggcctgctggtgatcaactgccggaccctccaggcggtgcgtcgt
ctggaaccctacgaccccccatcctccatacaggccctggcctcagcctctgtctgtcag
gganntgaggcagtgtggaccctggacgaccacaccaacaccctacagctctaccacgct
gccacctaccagctctgtgccacgtacagctgtggcgacgccaaccctctccgggacgtg
ttcactgtacagcgacctgcaggggttaccatggatacgactccctga
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integrated database retrieval system
