Coregonus clupeaformis (lake whitefish): 123484987
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Entry
123484987 CDS
T08357
Name
(RefSeq) PH-interacting protein-like
KO
K11797
PH-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123484987
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123484987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
McrBC
Motif
Other DBs
NCBI-GeneID:
123484987
NCBI-ProteinID:
XP_045071747
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
SDYSSDYSDWTADAGINLEPPKKKSTSSEEDGEKTKREGKRDRKKDKDGALPKEKPKEKR
KRAGFQEAGLSLEEWLPSAWITDTVPRRCPYIPQMGDEVYYFRQGHEAYVEMTKQNKIYS
INPKKQPWHKMELREQELVKIVGLKYEVGLPSLCCLKLAFLDPDTGRLTGGSFSMKYHDM
PDVIDFLVLRQQFDDARDRHWTIGDRFRSVIDDAWWFGTIEDQEPFQPEYPDSLFQCYNV
CWDNGDTEKMSPWDMEPIPNEVVFPEELGQSVPLTDAEQRALLYVPLEGEWGAANRNHEC
QRIVNAIDQLTTLDVAVPFALPVDLQAYPTYCTVVAYLTDLSTIRSRLENRFYRRMSSLM
WEVRYIEHNAQTFNETGAFIVKTAKFVSDLMLSFIKDQTLTDIIPLYNSMKKAAFSDTED
EDDEDGEEDADAPATSTRNKKGRGGLQQCGGVRRGRPRSFDPQAWRGRCRDLLDLLFQCE
DSEPFRQPVDLEQYPDYLDIVEMPMDFGTVRSMLSTGEYTSPLELCQDVRLIFSNSKAYT
PSKKSRIYSMSLRLSALFEEHVSSILADYKAVHGQTDTKTRHRPDRQTRRGADRPADRQT
RRGVDRPTRHSVDRPADRQTRRGADRPADRQTRRGVDRPADRPTRRGVDRPTRHSVDRPA
DRQTRRGVKRRRSDSPSSSTASSPEWKRRVSLRGVSRPDSSAPPLAPAAAPLRPPSLRQN
LPLVNGRVEPQTPGRTRITRTHTTSTADTHSTAVESSYWSLRGHNSGSSPGVAERSRLSL
RTDGSGGSMRRKLRTPVRHTPASPRSLSPQATVHVNGHSSQVKVDVPTGRRGQRPRAVTP
DPSPAPRGRPPGRKRGRKSKQEVEVMRRRGLCPSPTPEDEFDQSTGDEGGTSSSAQDIGA
GLPGTLCRRGRPRLIRTEEVPPPSSPDPSPSPLRRSSRRINDETTPPAQSLHQSRRVRES
PVDNENVNVKEGEEPGQEGEGSAGSMRTRNQGRRTACYTEEEEEEELEEEGEGQLLFEDS
SLTFGTSSKGRVRKLTEKAKANLIGW
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
agtgactactccagtgactactctgactggacggcagatgcagggatcaacctggaacca
ccaaagaagaagagcaccagctctgaggaggatggagagaagacgaagagggagggaaag
agagacaggaaaaaagacaaagacggagcgctaccgaaggagaagccaaaggagaagagg
aagagggcagggtttcaggaggcggggttatctctggaggagtggctaccgtcagcctgg
atcacagacacagtcccccggagatgtccctatataccacagatgggagacgaggtgtac
tacttccgtcagggccatgaggcgtatgtggagatgaccaaacagaacaagatctacagc
atcaaccccaagaaacaaccctggcacaagatggagctacgggagcaggaactggtgaag
atagtagggctaaaatatgaggttggtctcccctctctctgctgcctcaaactggccttc
ctggaccctgatactggcaggctgactggaggctccttctccatgaagtaccatgacatg
cccgatgtgattgacttcctggtcctacggcagcagtttgatgatgcgagagaccgccac
tggaccataggtgacaggttcaggtcagtgatagatgatgcctggtggttcgggaccatc
gaggaccaggagcctttccagcctgagtatccagacagcctgttccagtgctacaatgtt
tgctgggataacggtgacacggagaagatgagtccctgggacatggagcccatccccaac
gaggtagtgttcccagaggagctgggtcagagtgttcctctaacggacgcggagcagaga
gcgctgctgtacgttcccctggagggggagtggggcgccgccaacaggaaccacgagtgt
caacgcatcgtcaacgccatcgaccagctcaccacgcttgatgtagctgtgccgtttgcc
ttgccagtagatctccaggcgtatcctacctactgtactgtagtcgcctacctcacagac
ctcagcaccatacgatccaggctggagaaccgcttctacaggcgtatgtcatcgttgatg
tgggaggtgcgttatattgaacacaacgctcaaacctttaatgaaacaggagccttcatc
gttaaaacggccaagttcgtctctgacctcatgctcagcttcatcaaggaccaaactctg
actgacatcattcctctctacaactccatgaagaaggctgcattctctgacacagaggac
gaggatgatgaagatggggaggaagatgctgatgctcctgcaacgtccacacggaacaag
aagggtcgtggtggtctgcagcagtgtgggggtgtgaggcgaggtcgtccccggtccttt
gacccccaggcctggcgggggcgctgcagggatctgctagacctgctgttccagtgtgaa
gactctgaacccttcagacagcctgtcgacctggagcagtacccagactacctggacatt
gtggaaatgcccatggactttgggacggtacggagcatgctcagtacgggggagtacacc
tctcctctggagctctgccaggacgtccggctcatcttcagcaactctaaagcttacaca
cccagcaagaagtcccggatctacagtatgagtctgcgtctgtctgcgttgtttgaggaa
cacgtcagctccatcctggctgactacaaggccgtccacggacagacggacacaaagacc
cggcacaggccggacagacagacaagacgtggggcggacagaccagcagacagacagacg
agacgtggggtggacagaccgacgagacacagtgtggacagaccagcagacagacagacg
agacgtggggcggacagaccagcagacagacagacgagacgtggggtggacagaccagca
gacagaccgacgagacgtggggtggacagaccgacgagacacagtgtggacagaccagca
gacagacagacgagacgtggggtgaagaggagaaggagtgactctccctccagcagcaca
gcctcaagcccagagtggaagaggcgtgtgtcattgaggggcgtgtctagaccagactcc
tcagcccctcccctggctccagctgcagcccccctgcgccccccctccctgagacagaac
ctcccccttgtcaatgggagggtggagccacagacccctggacgaacacgcatcacaagg
acacacacaacctccacagcagacacacacagcacagcagtagagtcatcttactggtcg
ttgcgtggtcataactccggttcatctcccggtgttgctgagcgttctagactgtccctg
agaaccgacggcagcggagggagcatgcggcggaaactaaggacccccgtacgacacaca
cccgcgtcccctcgtagcctctccccccaggctacggtccacgtgaatggtcacagtagt
caggtgaaagtggacgtgcccacagggcgtagaggtcagagacctagagcggtgactcct
gaccccagccccgcccccaggggtcgcccacctggcaggaagagaggcaggaagtccaaa
caggaagtagaggtcatgaggaggaggggcctctgtccaagccccacccccgaggacgag
tttgaccaatccacgggcgacgagggcgggacttcatcctctgcccaggacataggtgcg
ggacttccaggaacgctgtgccgacgcggtagaccgagactcattaggacagaagaagtc
cctcccccttctagccctgacccctccccttcccctctgaggaggagcagtcggcgaatc
aatgacgagaccactccccccgcccagtctctgcaccaatcgcggcgtgtgagggagtct
ccagtggacaacgaaaacgtcaatgtaaaggaaggggaggagccgggacaggaaggggag
gggtcggcgggttcgatgcgtacgcgtaaccaggggcgacggacggcatgctacacggag
gaggaggaggaggaggagctggaggaggagggggagggacagctcctgtttgaagactcc
tccctcaccttcggcacttcttccaaggggcgtgtccgcaagctcacagagaaggccaag
gccaacctcatcggctggtaa
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