Coregonus clupeaformis (lake whitefish): 123485237
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Entry
123485237 CDS
T08357
Name
(RefSeq) cGMP-gated cation channel alpha-1-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
123485237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
123485237
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123485237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF6033
Connexin
MDM10
Motif
Other DBs
NCBI-GeneID:
123485237
NCBI-ProteinID:
XP_045072087
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MHKSFETFICFLRKKKEKKKQKEQEEKEKEEKEKEEKEKAEKEKKEKEEKEKKEKEMKEG
LKEAFVINPAGSLYYNWLLIITIPVMYNWTMIIARACFEELQDNHLVTWLILDYTSDVLY
LADMAFRTRTGYLEQGLLVKDKKLLQERYISSLQFKLDAVSMLPTDVFYIFLGINYPEIR
LNKLLRITRMMEFFTRTETKTNYTNLFRISILVMYIIIIIHWNACLYYSFSKSIGFGSDP
WVYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVLDFLVGVLI
FATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKELELRVITWFDYLWTNDKAQ
DERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGDYICK
KGDIGREMYIVKEGKLAVVADDGVTQFCVLGDGSYFGEISILAIKGSKAGNRRTANIRSI
GYSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIPETTEIEEKVN
RMYSNLELMQTKLKKLLGDYSTRQRASRERIAEIERLTGEDVAEEDLDEEEKEGREEEKK
EGEAEEKKEEKKEEEEKR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaagcttcgaaacatttatttgttttctcaggaaaaagaaagaaaagaagaag
caaaaagagcaggaggagaaagaaaaggaggagaaagaaaaggaggagaaagaaaaggcg
gagaaagaaaaaaaggaaaaagaggaaaaggagaaaaaggagaaagagatgaaggagggg
ctcaaagaagcgtttgtcatcaacccagcgggcagtctgtactacaactggttgttgatc
atcacaataccagtcatgtacaattggaccatgataatagccagggcctgctttgaggag
ctgcaggataatcacttagtcacctggttgattctggactacacctctgatgtcctctac
ctggctgacatggccttcaggaccaggacaggctacctggagcaaggcctgctggtcaaa
gacaagaagctgctgcaggagcgttacatcagcagcctccagttcaagctggacgctgtc
tccatgctgcccaccgatgtgttttacatcttcctgggaatcaactaccccgagatccgt
ctcaacaaactcctccgaatcacgcgtatgatggagttcttcacccgcaccgagaccaag
accaactacaccaacctcttccgcatctccatcctggtcatgtacatcatcatcatcatc
cactggaacgcctgcctctactactccttctctaagtccatcggcttcggctctgacccc
tgggtctacccggacctgaatgacccggaagagccagagttcggcgaactggggaggaag
tactccttcagcctctactggtccacgctgacgctgaccaccatcggcgagacgccgtca
ccggagctggactcagagttcttcttccatgtgctagacttcctggtgggtgtgcttatc
ttcgccaccctggtgggcaacatcagctccatgatctccaacatcagtgccgcgcgggtc
gagtttcaggcacgcatcgacaacatcaagcagtacatgcagaagtggaaggtggacaag
gaactggagctgcgcgtcatcacgtggttcgactacctgtggaccaacgacaaggctcag
gacgaaagggagacactgcgctacctgcccgacaagctcagggccgaaatcgccattaac
gtccacctagatactctcaagaaggtccgcatctttgctgactgcgaagcgggcctgctg
attgagctggtgctcaagctgcagccccaggttttcagccccggcgactacatctgtaag
aagggcgacatcggccgtgagatgtatattgtcaaagagggcaagctggcggtggtggct
gacgatggcgtcacgcagttctgcgtactgggagatggcagctactttggggagatcagt
atcctagcgataaagggttctaaggcagggaaccggaggacagccaacatccgcagcatt
ggctactcagatctcttctgcctgtccaaggatgacctgatggagtcgttgaccgagtac
ccggaagccaagggcatgctggaggagaaaggtcgtcaaatcctgctgaaggacggcctg
ctggaactggacccttccaaaattatccccgaaaccacagaaatcgaggagaaggtgaac
cgcatgtacagcaacctggagctgatgcagaccaagctgaagaagctgctgggagactac
agcaccagacagagggcctcgagggaacgcatcgctgagatagagcggctgactggagag
gatgtggcagaggaggacctagatgaggaggagaaggagggaagggaggaggagaaaaag
gaaggggaggcagaagagaaaaaggaggagaagaaagaggaagaggagaagaggtag
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