Coregonus clupeaformis (lake whitefish): 123485656
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Entry
123485656 CDS
T08357
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu03273
Virion - Lassa virus and SFTS virus
cclu04140
Autophagy - animal
cclu04142
Lysosome
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
123485656
03272 Virion - Hepatitis viruses
123485656
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123485656
04142 Lysosome
123485656
04140 Autophagy - animal
123485656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123485656
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
123485656
04090 CD molecules [BR:
cclu04090
]
123485656
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
123485656
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
123485656
Other autophagy associated proteins
RNautophagy/DNautophagy
123485656
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
123485656
CD molecules [BR:
cclu04090
]
Proteins
123485656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
123485656
NCBI-ProteinID:
XP_045072663
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MTPTHPCVVGIACFAILGCVTVAQALVTLEVTEGNSTCIKAELSASFSITYDTANGTRTV
MVPLPGSAVVGGASSCGGDGRSPWLVALFGDGHTLGLSFSSNNSLYSVSNLTLQYNLSDV
TTFPEANSTDVVTVETTSVGMVARVNTTYRCISVSPVIVGGATVTFSNVKMEAYMTGDDL
SPNESVCTADQNSTTAPPPPPSTTTAAPVPVPTPPGTPNQGSYSVSNSNGTVCLLARMAL
QLNISHFSALQNKTIQEVVNLLPNQTTSSGSCDPSSATLVLTQGGTTNLSFLFTLNTTSN
RYHLSGLSVVAAWSDMTAPFNTSNSSLDYLRGSLGRSYMCSSEQTLAVDQNFSLNTFQLQ
VQPFGLTRGQFAQAEECQLDQDNMLIPIVVGAALAGLVLIVLIAYLIGRKRRPAGYQTI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgactccaacacatccatgcgttgtcgggatcgcctgctttgcgattctaggttgcgtg
acagtagcccaggctctggtcactctggaggtgacagagggaaactccacctgtataaaa
gctgaactctccgcctccttctccatcacctatgacacagccaacggcacgcgtacggtg
atggtgcccctcccagggtcggcggtggtgggtggggccagctcgtgtgggggtgacggc
cgctccccctggctcgtggcgctgtttggggatggccacaccctgggcctcagcttctca
tccaataacagcctgtacagcgtatctaacctcaccctgcagtacaacctcagtgatgtc
actaccttcccagaggccaacagtaccgatgtggtaactgtggagacgacctctgtgggg
atggttgctagggtcaacaccacctacagatgtatcagcgtctcacctgtcattgtggga
ggagccaccgtcaccttctcaaacgtcaagatggaggcctacatgacaggagatgatctg
agccccaacgagagtgtgtgtactgctgaccagaactccaccacagccccccctccaccc
ccttccaccaccacagcagcccccgtccctgtccccaccccccctggaacccccaaccag
ggcagctactccgtctccaatagcaacgggactgtctgtctgttggcccgcatggcactg
cagctgaacatctcccacttctctgccttacagaataagactatccaggaagtagtaaac
ctgctgcccaatcagacgaccagctcaggatcatgtgacccctccagcgccaccctggtg
ctgacgcagggcggaaccaccaacctcagcttcctgtttactctgaacaccacgtctaac
aggtaccacctcagtggtctgtctgtggtcgcagcttggtctgacatgacagccccgttc
aacaccagtaacagtagtctggactacttgcgtggctccctggggcgtagctacatgtgt
agttcagaacagactctggctgtagaccagaacttctccctcaacaccttccagctgcag
gtccagcccttcggcctcaccagaggacagtttgcacaagcggaggagtgtcagttggat
caggacaacatgttgatccccatcgtcgtgggagcagctctggccggcctggttctaatc
gttctcattgcttacctcatcggcaggaagaggaggcccgctggataccagaccatctga
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integrated database retrieval system
