Coregonus clupeaformis (lake whitefish): 123485662
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Entry
123485662 CDS
T08357
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
123485662
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
123485662
Enzymes [BR:
cclu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
123485662
Glycosyltransferases [BR:
cclu01003
]
Unclassified
Sulfotransferases
123485662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Motif
Other DBs
NCBI-GeneID:
123485662
NCBI-ProteinID:
XP_045072676
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MFSPCTLALSLRGMMLLPSCGRLRRLFRQSHSFSLQTSLLLLFLFCMVSVLVSAYFLYGV
KRELEPAAGGGMGRPEEGTADWDDPRAATPPTSSRALPPRTARPSDVLRTDPVVLVFVES
LYSQLGQDVVAILESGRFLYRTEMAPGKGDMPTLTDKDRGRFTLVIYENILKYVNLDAWN
RDLLDKYCVEYGVGIIGFFKANENSLLSAQLKGFPLFLHSNLGLKDCSVNPKSPLLLITK
AREVERGPLPGDDWTVFQSNHSTYEPVLLARTRVPDLGLSGAGTGMGSSPLHASVVQDLG
LHDGIQRVLFGNNLNFWLHKLVFVDAVSFLTGKRLSLSLDRYLLVDIDDIFVGKEGTRMK
VSDVKALLETQNDLRTSVPNFTFNLGFSGKFFHTGTDEEDLGDDLLLSYGKVFWWFPHMW
SHMQPHLFHNQSVLAEQMLLNRRFAQEHGIPTNMGYAVAPHHSGVYPVHVQLYDAWKKVW
GIKVTSTEEYPHLKPARFRRGFYHSGISVLPRQTCGLFTHTIFYNEYPGGPKELDKLING
GELFLTVLLNPISIFMTHLSNYGNDRLGLYTFKNLVKFLQRWTNLRLQTLAPVQLAQRYF
QIFPEERDPIWQDPCEDKRHKDIWSKEKTCDRFPKLLIIGPQKTGTTAPMSWMMI
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgccgtgcactctggcactgagtctgcgtgggatgatgttgctgccgtcatgc
ggtcgcctccggcggctcttccgtcagtctcactccttcagtctccagaccagcctgctg
ctcctcttcctcttctgtatggtgagcgtcctggtctccgcctacttcctctacggagtc
aagcgggagctggagccggcggcgggggggggcatgggaaggccggaggagggcactgcc
gactgggacgacccccgggccgccacgccccccacctcctcccgggcgctccctccacgc
acagccaggccctcagacgtgttgcgcaccgaccctgtggtgctggtgtttgttgagagc
ctgtactcccagctgggacaggacgttgtggccatcctggagtctggacgcttcctctac
cgaaccgagatggccccggggaagggggacatgcccaccctgacagacaaggaccgaggc
cggttcacgctggtcatctacgagaacatcctgaaatacgtcaacctggacgcttggaac
agagacctgctggacaagtactgtgtggagtacggagtgggcatcataggcttctttaag
gccaacgagaacagcctactcagtgcccagttgaaaggcttccctctcttcctccattcc
aacctgggcctgaaggactgcagcgtcaaccccaagtcccccctgctcctcatcactaag
gcccgggaggtggagcgaggccccctacccggagacgactggaccgtcttccagtccaac
cactccacctacgagcctgttctcctagcgaggacccgggtgcctgacctgggcctgtcc
ggtgcggggacagggatgggcagcagccccctccatgcctctgtggtccaggaccttggg
ctccacgacggcatccagcgggtgctcttcggcaacaacctcaacttctggctgcacaag
cttgtgtttgttgacgctgtgtccttccttactggcaagaggctgtctctgtctctagat
cgctacctgctggtggacatcgatgacatcttcgtgggcaaggagggcacccgcatgaag
gtctcggatgtcaaggccctactggagacccagaatgacctacgaacctccgtccccaac
ttcaccttcaacctgggtttctctgggaagttcttccatactggtacggatgaggaggac
ctgggggatgacctgctcctctcctatgggaaggtgttctggtggttcccccacatgtgg
agtcacatgcagccccacctcttccacaaccagtcagtgctggctgaacagatgctcctc
aacaggaggtttgcacaggagcatggcatccccaccaacatgggctacgcggtggctccc
caccactctggggtgtaccccgtccacgtccagctgtacgacgcttggaagaaggtgtgg
ggcatcaaggtgaccagcacggaggagtacccccacctcaaacctgcccgcttcagacga
ggcttctaccacagtggcatcagtgtgctgcccaggcagacgtgtggcctgtttactcac
accatcttctacaacgagtatcctggaggacccaaggagctggacaaactcattaacgga
ggggagctcttcctcacggtgctcctcaacccgatcagcatcttcatgacccacctgtcc
aactacgggaacgaccgtctgggtctgtacacctttaagaacctggtgaagttcctccag
aggtggaccaacctgcggctgcagaccctggcgcctgtgcagctggctcagcgctacttc
cagatcttccccgaggagagggaccccatctggcaggacccctgtgaggacaaaaggcac
aaagacatctggtccaaagagaagacatgcgaccgattccctaagctactcatcattgga
ccacagaagacaggcaccacagccccgatgtcctggatgatgatctga
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