Coregonus clupeaformis (lake whitefish): 123486201
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Entry
123486201 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123486201
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
123486201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
Ig_2
LRR_9
ig
V-set
LRRNT
LRR_Zer-1
Ig_VEGFR-1-like_5th
Ig_5
Motif
Other DBs
NCBI-GeneID:
123486201
NCBI-ProteinID:
XP_045073397
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MFVEFVVRWGAWSILLQCGLLGVSAGDFPWPCPPRCVCRLETLEVNCSGKQLTSVSEGFA
SGAQHINLSRNKLKMLGRRQFFGMTQLEDLDISDNVISMIEVDAFQGLQNLKTLCIRSNR
LKIIPVGVFSGLPSLRFLDLSENEILVFLDYTFRELVSLQQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMIRLTISALPNNAFRRLHRLRSLIISHWP
SLDTLASNSLIGLNLTSLVISSCNLSAVPYQALRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGSLLRIEPGAFRGLAYFRLLNVTSNQLSTLEESAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPVPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYQCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSNAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRPSMGVGGGGGGG
GGDAGKFTMKLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtttgttgtccgatggggggcatggagcatcttgctccagtgtggatta
ttgggcgtgtcagcaggggacttcccctggccctgccctcccaggtgtgtgtgtcggctt
gagactttagaagtgaactgctctggcaaacagctgacttctgtgtctgagggcttcgct
agtggcgcccagcacattaacttatctcgtaacaaactgaagatgctgggtcgtcgccag
ttctttggcatgacccagctagaggatctggacattagtgacaatgtcatctccatgatt
gaggtggatgctttccagggtctgcagaacctcaagaccctgtgcattaggagcaaccgc
cttaagatcatccctgtgggggtcttctccggcctgcccagcctgcgcttcctggacctg
agtgagaacgagatcctggtctttctagactacaccttccgtgagttggtgagcctgcag
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttactggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatcccgactgaggca
ctgtcccagctccagagcctgactcggctgcgcatgatccgcctcaccatctcggcgctg
cccaacaatgccttccgccgcctgcaccggctacgcagcctcatcatctcccactggccc
tcgctggacaccctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggcgctgcgccacctggtctacctgggc
tacctggacctgtcctacaaccccatcacagccatccagggtaacctgctgggggacctg
ttgcggctgcaggaactgcacctggctgggggcagcctgctccgcatcgaaccaggggcc
ttcagggggctggcttacttccgtctgctcaatgtgacatccaaccagctcagcacgctg
gaggagagtgccttccactcggtggggaacctgcaggtcctgcggctggatgggaacccc
ctggcctgtgactgccggctgctctgggtggtccgccggcgacagcgcctgaactttgat
ggccgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcggagaaagagctcccgagactgttcacctgccggcaggcccgcattgtggaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcggacggt
gacccagtgccctcctttacctggttgtcggcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactcttgaggtacgctacgcccaggttcaggacagc
ggcacataccagtgcacggcgggcaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccctttttcaccgatgagggctggata
gagtcctcaaacgcccctactgccaactcctccgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcatcgccaccaccatgggcttcctgtccttcctcagctcggtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtccctcaatgggggtaggaggaggaggaggagggggt
ggaggggatgctggcaagttcaccatgaagcttatctaa
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