Coregonus clupeaformis (lake whitefish): 123486355
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Entry
123486355 CDS
T08357
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123486355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
123486355
03037 Cilium and associated proteins [BR:
cclu03037
]
123486355
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
123486355
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
123486355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
123486355
NCBI-ProteinID:
XP_045073591
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MEDKECNSVGIMRLVSEESCSSTVTDESRVYYQTEIFDQLPSSLARRTHHHQDRGTTETS
HPVEMHPGQAGGARDRAPTQPIRSLPVCMQRKREARYLVYLNLLQCLVIGGTILTPTAVY
DSDGDRGLLRFEGNDSVLDFFVGSGFLERSPMFYGFYACSSLDLQCLNTPLLFLLGTLTV
LILSLVMVVRRTVVGYKHTWLLGNHYNIHMSYKVFCGWDFCIHDPEAAAHKLSFIRNELK
LYLEEERFQQREARRTLGQWAHLYSLRGLLHFLVLVLLGGAFCLIYYATLASQAERSVDY
LIIRVLLHYLPPIVITLVNFFLPHVFRHIASFEDHSLTTQVNATIVRSIFLKLASLGMYL
FFLFRNREQECWENQFGKEMYKLSVFDFLACFCNTFFIAYPRKWLVERYPSSWLARLSGK
QHFLIPFNVLDLVYSQTVTWVGLFYCPLLPYIGIVKLVAIFYIKKLTVLQCCVPAQRMFR
ASSSSVLFHFMLLLGLIMAAITLGSNLQQFPPSPSCGPFVGSATVFNVTAVCVDSLPGLA
QSTLRYLSSEAFILPLILAQIVVLTTFESRRRANGNAIERLKDMLVMCTSDKHFLLKQHT
LSLRRQKKTFKAPTTVSGTKEGSPTTKKDPSAGIGEDSHITQLKDPSAQPTGDDSPS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagaatgcaacagcgtcggcatcatgaggctcgtatcagaggagagctgt
agctccactgtgacagacgagtcgcgtgtctactaccagactgagatctttgaccagctc
cccagctctctggcccgacggacccaccaccaccaggacagggggaccacggagacatcg
cacccagtagagatgcaccctggccaggcaggaggagccagggacagggcccctacccag
ccgatcaggagcctgccggtctgtatgcagaggaagagagaggcaagatatctggtttac
ctgaacctgctccagtgtctggtcataggagggaccatactcacaccaacagcagtctat
gacagcgatggtgacagaggacttctgaggtttgagggcaatgactcggttttggacttc
ttcgttggttcgggttttctagaacgttctccaatgttctatgggttctatgcatgtagt
tctctggacctgcagtgtctgaacacgcccctcctcttcctcctcggaaccctcaccgtc
ctcatcctcagtctggtcatggtggtccgcaggacggttgtaggctacaagcacacgtgg
ttgctaggcaaccactacaacatccacatgagctacaaggtgttctgtgggtgggacttc
tgtatccatgatcccgaggccgccgcccacaaactcagcttcatcaggaacgaactgaag
ttgtacctagaagaggaaaggttccagcagcgcgaggccaggaggacgttgggtcagtgg
gcacacctctactccctgcgagggctgcttcacttcctggtcctggttctactgggcgga
gccttctgtctcatctactatgccaccttggcctcacaggctgagaggagtgtagactat
ttgatcatcagggtgcttctccattaccttcctcccatcgtcatcaccctagtcaacttc
ttcctgcctcacgtcttccgccatatcgcttccttcgaggatcactccctcaccacccag
gtcaatgctaccatcgtcaggagtattttcctgaagttggccagtctggggatgtatctc
ttcttcctcttcagaaacagagaacaggaatgttgggagaatcagtttggtaaagagatg
tacaagctctctgtgttcgatttcctcgcctgtttctgcaacaccttcttcatcgcctat
cctagaaagtggttggtggaaaggtacccatcgtcttggctggcgcggttgtcggggaaa
caacatttcctgatcccgttcaatgttctagacctggtgtacagtcagacggtcacctgg
gtaggactgttctattgtcccctgctgccatacatagggattgtcaaactggtggccatc
ttttacattaagaagttgacagtactccagtgctgtgttccggcccagagaatgttccgt
gcctccagttcttcagttctgttccacttcatgttactactgggtctcatcatggcagcc
atcacccttggaagtaacctccaacagtttcccccctcccccagctgtggtccgttcgtg
ggcagcgctacagtgtttaatgtaacagctgtgtgtgtggacagtctgccaggactggcc
cagtccaccctgagatacctgtcctcagaggccttcattctgcctctgatactggctcag
attgttgtcctgaccacctttgagtcacggaggagagcaaatggaaacgccattgagaga
ctgaaggacatgctggtgatgtgcacctcagataagcattttctgctgaagcagcacact
ctctcactcagacgccagaagaaaaccttcaaggcccccaccactgtttcaggcacgaaa
gagggcagccctaccaccaagaaggacccctcagcaggcatcggagaggacagccatatc
actcaactgaaggacccctctgcacagcctacaggagatgacagcccatcatag
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