Coregonus clupeaformis (lake whitefish): 123486569
Help
Entry
123486569 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123486569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123486569
03036 Chromosome and associated proteins [BR:
cclu03036
]
123486569
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123486569
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123486569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
123486569
NCBI-ProteinID:
XP_045073846
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MFSPRPTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFAYCADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGSYTETV
VDMGENLCNFVVAVRGGSFIVSSYRGQLLRLRADPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEVDEVTEHQVLSWDSSRALRESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAATWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLVLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDHLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLYSSLAGAGPE
ATAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPEGDGDGEVGGDLD
LVVTRINLDLVDDYPASDPRWAESVPDENAGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHTKHSELVNRAILTALRKSDAT
VSASLTAADVFFRELCVVFQEMLQAAGQYRDTKASLYRASEAAPAEPEYIPWTASSGLGG
VRTVIARQHEVILRDVYPHADSELRNGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDR
YNTLEMEYTQRRSELLAPLLELGQYQWVAALAEKYCDFDILVQMCELTDNQNRLQHYMAK
FADQNFADFLFRWYMEKGKRGKLLSQPVAQHQQLASFLQSHEHLSWLHHIHVHDFSSAHK
TLYDQANMETRYFVKKKTLLALSKLTALASDMPEAVLKKRVDDMVEQERFLLHQETLPKQ
LLEEKQQSPDTMPLLSAHNLIHLYICDDNRRANEYDFKKALDLLEYIDEEDAVDIAGLKC
EIFCKALKKDDWSSADGNDDPLEAAKDSIFVKILLKLIQEGVPLQTYLPDVKDLLQVDEM
EALKSKPTFEFVLRANYEHYLQAQI
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgtcccacccctagttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtcttgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgtcagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgcctactgtgctgatctcatctccatatca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtggctccg
gagggaacagcccggttctggcccagtttggcccacgaggggagttacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgttgctgtcagggggggtagtttcatc
gtgtcctcctataggggccagttgttgcgtctcagggcggacccctccggaaagctgctg
cagagggcgctacagcagggtcagggggtgctttccggcatcggacgccgcgtctccagc
ctctttggcatgcttgccccgctcaccaacaacaatctccacagtgttctgtgggtggga
gagacaggctgcctgtatactctgacctcttgtgggctcagtaaatgggaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgagggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggagggagtaaacgttacc
tacatggacatgcagctcagccaggatggcctggtagtgttggcagcaacctggcaccct
tcagattccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gccctccaggccatgaggctggtgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtacaggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccatctgcgtggtgggggctgctgtgccaacctg
ccagtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctcc
atgctgcctgagaccatggaggactccctctactcctccctggctggggccggccctgag
gcaactgctatggagactccgactaggatggagcctgtagcacaagaggacaaaaccaaa
ctcctaaaagcagcattcctgcagttctgccggaatgatctggtgggggcccagaccatg
acagacgagctgttccccccggagggggacggagacggggaggtgggcggggatctggac
ctggtggtgacccggatcaacctggacctggtggacgactacccagcctcagacccccgc
tgggcagagtctgtccctgacgagaatgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtg
ggtctcctggaccggctgggccagaccgcagtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgcgagcatgctgagaagctacaggcggccatgacgctgaagaaccaccacacc
aaacacagcgagctggtcaatcgcgccatcctcactgccttgaggaagagcgacgcaacc
gtgtccgctagcctcacggctgcagacgtcttcttcagagagttgtgtgttgtattccag
gaaatgctgcaggctgctggtcagtacagagacaccaaggcctcactgtacagagcctca
gaggccgcccctgctgaaccagaatacatcccatggaccgcctctagcggtctgggcggg
gtgcgcaccgtcatcgcccgccagcacgaggtgatcctgcgcgacgtgtaccctcacgcc
gactcggagctgcgcaacggcctgaacgagcagctggcggcgctgctggacgtgctcctg
ggaggctacgtggcccagctgacctcactgagaccgggccggccgggccagcaggaccgc
tacaacaccctggagatggagtacacacagcgccgctctgagctgctcgcaccattgttg
gagctgggtcagtaccagtgggtggcggcgctggcagagaagtactgtgactttgacatc
ctggtccagatgtgtgagttgactgacaaccagaacagactgcagcactacatggccaag
ttcgccgaccagaactttgcggacttcctgttccgctggtacatggagaaggggaagcgg
ggcaagctgctctcccagcccgtcgcccagcaccagcagctggccagcttcctgcagtcc
catgaacacctcagctggctgcaccacatccacgtccatgatttcagcagcgcccacaaa
accctgtacgaccaggccaacatggagacacgttactttgtgaagaagaagaccctgttg
gctctcagtaaactgactgccctggcatcagacatgcctgaggctgtgttgaagaaacga
gtagatgacatggtagagcaggagcggttcctgctgcaccaggagactctgcccaaacag
ctgctggaggagaaacagcagagcccagacaccatgcccctgctcagcgctcacaacctt
attcatctgtatatttgtgatgacaacagacgagccaatgagtatgacttcaagaaggct
cttgatctactggagtacatagacgaggaggacgcggtggacattgcgggactcaagtgt
gagatcttctgtaaggccctcaagaaagatgactggtcgtctgctgatgggaatgatgac
cctctggaagcagccaaggacagcatctttgtcaagatcctcctcaagctcatacaagaa
ggcgttcctctacagacctaccttcctgacgtcaaagatcttcttcaggtggacgagatg
gaggctttgaaatcaaagcccacttttgagtttgtcctgcgggccaactatgaacattat
ctgcaagcacagatctga
DBGET
integrated database retrieval system
