Coregonus clupeaformis (lake whitefish): 123486962
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Entry
123486962 CDS
T08357
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123486962
04121 Ubiquitin system [BR:
cclu04121
]
123486962
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123486962
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123486962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
123486962
NCBI-ProteinID:
XP_045074059
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MFSQRLGQNSARAKNITATIAKFICKDMRPYSVVENPGFREMIQTLEPRYTIPSRPHFSK
KVIPALYESTKNDVKLSLSKAERVAITTDGWTSCSNQGYVTITSHHIDPEWKMKTFVLLT
RVLNEAHTGKNIGTLLREACMEWKIYDKNPAIVTDNARNMIVAGAEAQFSPHITCFAHTL
NLASQKGLGWTVLPGCWGKCENLLDIFTAARLHVTPYRKNKLMDLPKQKLIQDIITRWNS
SFEMLERFLEQQPAIMATLMSKDLRKGVTDVGTLSDIANMDDIVQLMGPVKMATTVMCEE
DQPTLSVIAPLQAKLLKHLQPCEDDSTLVAEIKRVMASDLSTRYRGTQDALNIASALDPR
FKELPYLEKEDREQVYTKLVFEAEVSHQMQAMGNQEEDEGSSSTKLSGFNEETTAPNESP
PCKKKALDALFGDSFTQRERKSTSETARAEVLKYRAKDALPLTENAMKWWRSQEKELPVL
STLAKRYLCIPGTSVPAEHVFSTAGDMVNAQRSVLQPDHVDQLIF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcagagactaggccaaaactcagctcgggcgaaaaacatcacggcaacaatt
gccaagtttatctgcaaagacatgcgaccctacagtgtggttgaaaatccgggattccgt
gaaatgattcaaacattggagccaaggtacacaataccaagccgaccacacttctcaaaa
aaggttattcctgcattgtacgaaagtactaagaatgatgtgaagctgtcgctttctaaa
gctgaacgagtagcgataacgacagatggctggacgtcatgctcaaatcaagggtatgtg
acaattacctctcatcacattgatccggagtggaaaatgaagacctttgttctgctaacc
agagttttaaatgaagcccatactggtaaaaatattggcacgttactgcgtgaagcctgc
atggagtggaaaatctacgacaagaatcctgccatcgtcacagataacgccaggaatatg
attgtggccggtgcagaagcccagttcagtccacacattacctgcttcgcacatacactc
aaccttgcctcgcagaagggtttggggtggaccgtacttccaggttgttggggaaagtgc
gaaaatttgttggatattttcaccgcagcccgattgcatgtcacgccctacaggaaaaac
aaactgatggatttaccaaaacagaaactgatccaagacataatcaccagatggaacagt
tcattcgaaatgcttgaacgttttttggaacaacagccagctataatggcaactctgatg
tccaaggatctacgaaagggggtcacagatgtaggcacgctgagtgatattgccaacatg
gatgacattgttcagttgatgggtcctgtcaaaatggcaaccactgtgatgtgtgaagaa
gaccagccaactctctctgtaattgctcctcttcaagcaaaactgctgaaacacctacag
ccatgcgaagacgactcaaccctggttgcagagattaagagggtgatggccagtgacctc
tccacacgctacagaggcacccaagatgctctcaacatagcatcagcgttggacccgcga
tttaaagaactgccctacctggaaaaagaggacagagaacaggtctacacaaaactggtt
tttgaggcagaagtgtcccaccagatgcaagcaatgggaaatcaggaggaagacgaggga
agctcaagcacaaagctgtcaggattcaatgaagagaccacagctccaaatgagtcacct
ccttgtaagaagaaagccttagatgcgctgtttggcgattccttcacccaaagagaaaga
aaatccacaagcgagacagccagagcagaggtgttaaagtaccgagcaaaggatgcgttg
cctttgactgaaaatgccatgaagtggtggagatctcaggagaaagagctacctgtactt
tccacccttgctaaacggtacctgtgcattccaggcaccagtgtgccagcagaacacgtt
tttagtactgctggcgacatggtgaacgcacagagaagtgttctgcagccagatcatgtt
gatcagttgatattttga
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