Coregonus clupeaformis (lake whitefish): 123487240
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Entry
123487240 CDS
T08357
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123487240 (wipi2)
04136 Autophagy - other
123487240 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123487240 (wipi2)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
123487240 (wipi2)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123487240 (wipi2)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123487240 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
DUF7165
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123487240
NCBI-ProteinID:
XP_045074353
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
VHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALVFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLEIQKEKPAEEPTTWGGYFGKVLMASTTYLPSQVTEMFTQGR
AFATVRLPFSGHKNICALALIQKIPRLLVAAADGYLYLYNLDPQEGGECSLMKQHRLDGG
AEPPNEILEQGSHDRPLTTQTYNTAGMK
NT seq
1165 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggctagtcagagcggggaggccggctgtagccagctcctctttgccaacttt
aaccaggacaacacgtctttagctgttggaaccaaatcaggctacaagttcttctctcta
tcgtctgtggacaagttggagcagatttatgaatgtacggacacggaggatgtgtgtatt
gtagagcgtctgttcagcagtagtctggtggccatcgtcagtctgaaggctcccaggaag
ctgaaggtctgtcacttcaagaagggaacagagatctgcaactacagttacagcaacacg
atactggctgtcaagctcaacagacagaggctgatagtatgtctggaggagtctctttac
gtccacaacatcagagacatgaaggtcctgcacaccatcagagagacgcctcccaacccc
tcagggttgtgtgcgctctccatcagtaatgacaactgttacctggcctaccccggcagc
gctaccatcggagaggtccaggtgttcgacacggtgaacctgagggccgccaacatgatc
ccagcccatgacagtccgttagcagctctggtgtttgatgctagcggaaccaaactggcc
acagcctcggagaagggtacggtgattcgtgtgttctccatccctgagggacagaaactg
tttgagttccgtcgaggagtcaaaaggtgtgtgtctatctgttccctggccttcagtatg
gaaggtctctacctgtcagcatccagcaacactgagacggtccacatcttcaaactggag
attcagaaagagaagcctgcggaggagcccactacatggggtggttactttgggaaggtg
ctgatggcatccaccacctacctgccctctcaggtgacagagatgttcactcagggacga
gccttcgccaccgtacgactgcccttctctggacacaagaacatctgcgctctggccctg
atccagaagattcctcgtctcctggtcgcagcagctgatggatatctgtacctctataac
ctggatccacaggagggaggagagtgctcactgatgaaacaacacaggttagacggcggt
gctgagccgcccaatgagatcctggaacaggggtcacatgaccgaccccttaccacacag
acctacaacactgctgggatgaaag
DBGET
integrated database retrieval system
