Coregonus clupeaformis (lake whitefish): 123487510
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Entry
123487510 CDS
T08357
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123487510
03036 Chromosome and associated proteins [BR:
cclu03036
]
123487510
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123487510
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
123487510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
123487510
NCBI-ProteinID:
XP_045074657
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSPTIPEQKSKTMNGN
SAPHQQIHTVENYMSGNKVYTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVQGHRYSTCSAYDGVVLNKPVPPPGNRCNSICVTTNHDGRYNA
TSPRSSFASSLSSQEQSKHASPRSSISSPRTSLVVPGLDKYTSPRSSLVHCEGSSVLSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGMPLASPRSSICSQDGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLQLPSPRSSMLGTGLQEDILTHDCGDTNGVHNRIHLQALSG
MPEAQPQHAPQQSTQAGMNTEVTAGSPSSSYGLHTKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCG
RRLRGKAFYNVNGRVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLEGHLLCHGCHIRRLKVPGPAHPPPSYPLHVTEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatgggatgtacagttcaaggagggacatggttatcaacccc
gatttggatttttcgtctccaacgatacccgagcagaaaagtaagacaatgaatggcaac
tctgcgcctcaccaacagatacacaccgttgagaattacatgtctgggaataaagtgtac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacatagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcggcacaggaggtactccttggaggtgcagggg
cataggtacagcacttgtagcgcgtacgatggagtggttttgaacaagccagtaccgcca
cctggcaacagatgcaacagtatctgtgttaccaccaaccacgacggcagatacaatgca
accagcccgcggtccagtttcgcatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtctggtggtacccgggctagacaag
tacacgagtcccaggtccagtctggtacactgtgaagggagcagtgtcctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattctgattcgcgttacatgcctgtggggaaccatgatctggag
ggtgcggttttgcatggcatgccgttggctagtcctcggtcaagcatctgcagccaggac
gggtgcgcaagacccgggacaatagctaactgcgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttccaggagctccaggggatctatgagcacctacccggatctc
caactgccttcacccaggtcctcaatgctggggactggtttgcaggaggacatactaact
cacgattgtggagataccaacggtgtccataatcgtatccatctccaagcgctctcgggg
atgccagaagcccagccacagcatgcaccacaacagtcaacccaggcagggatgaataca
gaggtgaccgctggatcaccatcatcttcttatgggctccatacgaaaactccagcctca
gggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttagagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtatcaagtgtgggaagggtgtgtatggggccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttgctcctgtgga
aggaggctgagagggaaagctttctacaatgtcaacggcagggtctactgtgaagaggac
ttcctgtactctggttttcagcagacggcagagaagtgctttgtgtgtggtcacctcatc
atggaaatgatcctgcaggcactgggcaagtcctaccaccctggctgcttccgctgtgtg
gtctgtacagagggtctggacggagtgcctttcactgtggacgtggagaacaacatctac
tgtgtcaaagactaccacacggtctttgccccaaaatgtgcctcatgcaaccagcccatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgcgaggactgtggcctccagctaaacgacgaggagggtcaccgc
tgttaccccctggagggccacctgctctgtcacggctgccacatccgcaggctcaaggtc
ccggggcccgcccacccgccccccagctacccacttcacgtcactgagctgtga
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