Coregonus clupeaformis (lake whitefish): 123487707
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Entry
123487707 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: importin-5-like
KO
K20222
importin-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123487707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
123487707
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123487707
Pre-60S particles
123487707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT_EZ
HEAT
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
Importin_rep_5
PDS5
Adaptin_N
HEAT_EF3_N
TPR_TNPO3_IPO13_3rd
IBN_N
Cnd3
MMS19_C
ARM_ARMC5
TPR_Trm732_C
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
123487707
NCBI-ProteinID:
XP_045074742
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MAEQQQFYSLLGNLMSPDNDIRKQSEEAYDTIPGQTKITFLLQAIRDADCAEEVKTMAAV
LLRRLLSSSFEEIYPGLTVDMQTAIKTELVTSIQTEASPNIRKKVADIAAELCRNLLDDD
GNNQWPELLKFLFDSVNSDNVGLREAALHIFWNFPGIFGNQQQHYMEVIKRMLVQCMQDQ
ENPQIRTLAARAAASFVLSNEGNTALLKHFSDLLPGILQAVNESCYQGDDSVLKSLVEIA
DTAPKYLRPNLEATLQLSLKLCADTNLTNMQRQLALEVIVTLSETAAAMLRKHTAIVASS
VPQMLAMMVDLEEDEEWSMADELEDDDFDSNAVAGESALDRMACGLGGKIVLPMIKQHIM
TMLQNPDWKYRHAGLMALSAIGEGCHQQMEAILNEIVNXVLLFCQDPHPRVRYAACNAIG
QMATDFAPTFQKKFHDKVISALLQTMEDQTNPRVQAHAAAXLINFTEDCPKSLLIPYLDS
LVQHLHVIMVAKLQESRLLFFCLCLIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFM
PSLKHIVENAVQKELRLLRGKTIECISLIGLAVGKDKFMPDASAVMQLLLKTQTDFNDLE
DDDPQISYMISAWARMCKILGKEFQQYLPVVMGPLTKTASIKPEVALLDTQDMENMSEDD
GWEFVNLGDQQSFGIKTAGLEEKATACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYF
HDGVRVAAAESMPLLLECARVRGPDYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAK
CIELMGEGCLNNEHFEELGGILKGKLEEHFKNQELRQAKRQDEDYDEGMEETLQDEDEND
VYILTKVSDILHSVFSSYKEQVLPWFEQLLQLIVQLVCPSRPWADRQWGLCIFDDVVEHC
SPSSFKYADYFLRPMAQSLCDTSPEVRQAAAYGVGVMAQYGGENYRPFCTEALPLLVGVI
QSPDSKVKENVNATENCISAVGKVMRFRPECANVNEILPHWLSWLPLNEDKEEAVHTFDF
LCDLIESNNPIVLGPDNANLPKIFQIIAEGVTNESVKSEDACSKRLANVIRQVQGSGGLW
TQCVAMLNETQQKAIQDLLNTA
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagcagcagttctacagcttgctgggcaacctgatgagccctgacaacgac
atcaggaaacagtccgaggaagcttatgacaccatccccggtcagacaaagatcacattt
ttgctgcaggccatcagagatgcagactgtgcagaagaggtcaagacgatggcggcggtg
ctgctgcgccggctgctgtcgtcctccttcgaggagatctaccccggcctgacggtggac
atgcagacggccatcaagacagagctggtcacaagcatccagacagaggcctcgcccaac
atccgcaagaaggtcgccgacatcgctgcagagctctgccgcaacctcctagatgatgat
ggaaacaaccagtggccagaactgctcaagttcctgtttgactcggtcaactctgacaac
gttggcctgagagaggctgccctgcatatattctggaacttcccaggtatctttggcaac
cagcagcagcactacatggaggtgatcaagaggatgctggtacagtgtatgcaggaccag
gagaacccgcagatccgtaccctggctgcccgtgctgcagcctccttcgtcctgtccaac
gagggcaacaccgccctgctgaagcacttctctgacctgctgccaggcatcctgcaggcg
gtgaatgagtcgtgctaccagggagatgactctgtgctgaagtctctggtggagatagct
gacacggcccccaagtacctgcggcccaacctggaggccaccctacagctcagcctgaag
ctgtgtgctgacaccaacctgaccaacatgcagaggcagctggccctggaggtcatcgtc
acgctgtccgagaccgccgccgccatgctgaggaaacacaccgccatcgtggcatccagc
gttccccagatgctggctatgatggtggatctggaggaggatgaggagtggtctatggct
gacgagctggaggacgatgactttgacagcaatgcagttgcaggagagagtgctctggac
agaatggcctgtgggctgggaggaaagatcgtgttacccatgatcaagcagcacatcatg
actatgctgcagaaccctgactggaagtaccgccacgccggcctcatggctctgtctgcc
atcggggagggctgccaccagcagatggaggccatcctcaacgagatcgtcaacnncgtg
ctgctgttctgtcaggaccctcaccccagagtccgctatgctgcgtgtaacgccatcggg
cagatggccaccgatttcgcccccaccttccaaaagaaattccacgataaggtgatctct
gccctactgcagaccatggaggaccagaccaacccacgtgtccaggcccacgctgccgcg
ngcctcatcaacttcactgaggactgccccaagtccctccttatcccctacctggacagc
ctggtccagcacctacatgtcatcatggtggccaaactacaggagagtcgtctgttgttt
ttctgtctttgtctgatccaaaagggcaccaagctggttctagagcaggtggtgacgtcc
atagcgtctgtggcggacacggccgaggagaagtttgttccctactacgacctgttcatg
ccctccctcaaacacatcgtggagaacgccgtgcagaaggaactgaggctgctcaggggg
aagaccatcgagtgtatcagcctcatcggcctggccgtcggcaaggacaagttcatgcct
gatgcgtcagctgtgatgcagctgctgctgaagacccagacagacttcaatgacctggag
gatgacgacccacagatctcctacatgatctcggcatgggctaggatgtgtaagatcctg
gggaaggagttccagcagtacctgcctgtggtcatggggcccctcacgaagactgcctcc
atcaagccagaggtggccctcctggacacccaggacatggagaacatgtcagaggatgac
ggatgggagtttgtgaacctgggagaccagcagagcttcggcatcaagacagccggtctg
gaagagaaggccaccgcctgccagatgctggtgtgctatgccaaagagttgaaggaaggg
ttcgtggagtacacagaacaggtggtcaagctgatggttcctctgctcaagttctacttc
catgatggtgtgcgggtggcagcagcagagtccatgcccctgctgttggagtgtgcgcgg
gtgcgaggcccagactacctaacacagatgtggcacttcatgtgcgacgccctcatcaag
gccattggcacagagccggactcggacgtcctatcagaaatcatgcattcgtttgccaag
tgcattgagttaatgggagagggctgcctgaacaacgagcactttgaagagctgggaggg
atcctgaaagggaagcttgaggaacactttaagaaccaggagctgagacaggccaaacga
caggatgaggactacgacgaggggatggaggaaactttacaagacgaggatgaaaacgat
gtgtacatactgaccaaagtgtcagatattttgcactctgtgttcagcagttacaaggaa
caagtgctgccctggtttgagcagcttctacagctcatcgtacagcttgtgtgtcctagc
aggccatgggcagacaggcagtggggtctgtgcatctttgacgacgtggtcgagcactgc
agcccctcttcctttaaatacgcagactacttcctgcggcccatggcccagtccctgtgt
gacaccagccctgaggtgagacaagctgcagcctacggagtgggagtcatggctcagtac
ggaggagagaactaccgacccttctgcacagaggccctgcccctactggtgggagtgatc
cagtctccagactccaaggtcaaggagaatgtcaacgccacagagaactgcatctcagcc
gtgggcaaggtcatgaggttcaggcccgagtgtgccaacgtcaacgagatccttccccat
tggctctcctggctgccactcaacgaagacaaggaggaagctgtgcacaccttcgacttc
ctgtgtgaccttattgaaagcaacaatcctattgtcctcggaccagacaatgcaaatctt
cccaagatattccagatcatcgctgaaggggtcacaaacgagtctgttaagagtgaggat
gcatgcagcaagagattggcaaatgtcatccgtcaagtgcagggttctggaggactgtgg
acacagtgtgtagcgatgctgaatgagacgcaacagaaggccatccaggacctcctcaac
accgcttga
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