Coregonus clupeaformis (lake whitefish): 123488629
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Entry
123488629 CDS
T08357
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like
KO
K17908
autophagy-related protein 18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123488629
04136 Autophagy - other
123488629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123488629
03029 Mitochondrial biogenesis [BR:
cclu03029
]
123488629
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123488629
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123488629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
DUF7165
BCAS3_WD40
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
123488629
NCBI-ProteinID:
XP_045075430
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMIPAHDSP
LAALVFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMEGLYLS
ASSNTETVHIFKLEIQKEKPAEEPTTWGGYFGKVLMASTTYLPSQVTEMFTQGRAFATVR
LPFSGHKNICALALIQKIPRLLVAAADGYLYLYNLDPQDGGECSLMKQHRLDGGAEPPNE
ILEQGSHDRPLTTQTYNTAGMKGYCEEAGAVGGAGLEDDLSDLRLDDENEEQPPLILETD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctgcacaccatcagagagacgcctcccaacccctcagggttgtgtgcactc
tccatcagtaatgacaactgttacctggcctaccccggcagcgctaccataggagaggtc
caggtgttcgacacggtgaacctgagggccgccaacatgatcccagcccatgacagtccg
ttagcagctctggtgtttgatgctagcggaaccaaactggccacagcctcggagaagggt
acggtgattcgtgtgttctccatccctgagggacagaaactgtttgagttccgtcgagga
gtcaaaaggtgtgtgtctatctgttccctggccttcagtatggaaggtctctacctgtca
gcatccagcaacactgagacggtccacatcttcaaactggagattcagaaagagaagcca
gcggaggagccgaccacatggggtggttactttgggaaggtgctgatggcatcgaccacc
tacctgccctctcaggtgaccgagatgttcactcagggacgagccttcgccaccgtacga
ctgcccttctctggacacaagaacatctgcgctctggccctgatccagaagattcctcgt
ctcctggtcgcagcagctgatggatatctgtacctctataacctggatccacaggatgga
ggagagtgctcactgatgaaacaacacaggttagacggcggtgctgagccgcccaatgag
atcctggaacaggggtcacatgaccgaccccttaccacacagacctacaacactgctggg
atgaaaggttactgtgaggaggcaggtgcagtgggaggggcgggactagaggatgacctc
agtgatctacgattggacgatgagaatgaggagcagccaccactcatcctggagacggac
tga
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integrated database retrieval system
