Coregonus clupeaformis (lake whitefish): 123488812
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Entry
123488812 CDS
T08357
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123488812
04136 Autophagy - other
123488812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123488812
04121 Ubiquitin system [BR:
cclu04121
]
123488812
03029 Mitochondrial biogenesis [BR:
cclu03029
]
123488812
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123488812
Ubiquitin system [BR:
cclu04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
123488812
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123488812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
123488812
NCBI-ProteinID:
XP_045075526
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MQNAINSVKGTALGVAEFFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWVSGEE
EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGVGGVT
EAVREISLDNKDNMNMNMNVNSGASGNGDDDEDEGEAADMEEYEESGLLETDEATLDTSK
MVDLSKSKTGEAGNDDILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDIS
QDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKRIIETVAEGGGELGVHMYLLIFLKFV
QAVIPTIEYDYTRHFTM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgccattaattccgtaaaaggcacggcccttggtgtggccgagtttttcact
ccagtactgaaggaatccaaattcaaggagactggagttatcactccagaagagtttgta
gctgctggagatcaccttgttcatcactgccccacatggaaatgggtgtctggggaagag
gagaaggtgaagccatatttacccaaggataagcagttcctattaactcgcaatgttcct
tgttacaagcgctgtaaacagatggagtattgtgatgaactggaagccatcatagaggag
gatgacggcgatggaggatgggtcgacacctaccacaactcaggtgtagggggagttaca
gaagccgtgcgagaaatctcattggacaataaggacaacatgaacatgaacatgaacgtg
aactctggtgctagtgggaatggtgatgatgatgaagatgaaggcgaggcagcagatatg
gaagagtatgaggagagtggactactggaaacagatgaggccaccctggacaccagtaaa
atggtggacttgtctaaatccaaaacgggagaggctgggaacgatgacatcctgcagact
cgaacctatgacctctacatcacatatgacaaatattatcagactcctcgactctggctg
tttggatacgatgaggacagacagcccctgacagtggatcagatgtacgaggacatcagc
caggatcatgtgaagaaaacggtcaccatcgaaaatcacccccacctaccaccccctgcc
atgtgctctgtgcatccctgcagacatgctgaagtgatgaaaaggataatcgagaccgtg
gcggaagggggaggagaacttggagttcatatgtatctgttgattttcttgaagtttgtc
caagccgtcatccccacgatagaatacgactacacaaggcacttcaccatgtag
DBGET
integrated database retrieval system
