Coregonus clupeaformis (lake whitefish): 123489045
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Entry
123489045 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123489045
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
123489045
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
123489045
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
123489045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fn3_Dep-1_4th
FN3_Tor_3rd
Ig_ILCR1
Pur_ac_phosph_N
DUF4249
PTP_tm
Motif
Other DBs
NCBI-GeneID:
123489045
NCBI-ProteinID:
XP_045075691
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MVGVIDGSAMKITWSPPRGDRENYRVLLLNGTVALLNETVSRLGRQYSFSGASLGLVPGR
LYTAQVMVESGLFGNTAQCQGRLAPRPVQQLVVRHSDETSLSVLWSRPEGVWDGYTVVLR
QADTVVSQRTLSRDVRECTFNVLMPGRQYAIAVTTNSGGLNSSASVIGRTTPAQVTSLRV
TNGGSTDSLQTQWERAAGELDSYRVLLIHDSSVIKNESTSAHTTAYSFLALKPGALYRVV
VITVRAGQASRQSVAEGHTDPAAVGVVTVSNNGRMDFLSVSWRPAQGDVDSYLVTLRDRE
RTVHTLVVSKSSPECVFKSLVSGRLYNISIISRSGVYENHTIVQERTQPSSVQNPTAIHS
ARDDYLKVYWRHAAGDFDYYQVVIKHNNIFHQNKTVMKSQNKCVFKGLVPGRLYTVIVST
WSGKYETSMSTDGRTFPAAVRSLALAGRGTEDLRVTWLAAPGDVDHYEVQLLFNDMKVFP
PITLGSNVGKCVLSSLTPGRLYKIHVSTFSGPNQRAQFIEGRTVPSKVKNIHVSNNGQSN
SLKISWTPGQGDVDSYSVSLSLDGPEGRMLETRPVPKHLNQLGFSSLQPGQLYSVTVRSI
SGILLNNNTASGRTVPSAVTGLQADNRHTTCSIQVSWQEARGVADGYSLQLLDDRGHLVT
NSSQASSGSTPLQHHFDGLTPGKRYHILVHTTSGGVHSEEVTTEARTRPAAVSNLSIQAN
SSSSLSFHWSPPEGELEGYDLYLYNGDDTLYDRRSGLPNTLQVSFQGLRPGVSYRMVVLT
RSGEQTNDIAIWARTVPAAVTSLHQSEVLWVSWERAAGELSGYLLSVYNPDGSQQAEESL
GPDATEHAVPTLIPGRLYHAVILTRSGELTNRATTQGRTAPRPPTSVSFGGVTNTSLELN
WSGPAGSDYDDFDLQWAPRDHLSVFNPYHTRTSGSRILKGLYPGRLYNFSLRTVSGAVRG
VGEDGSPAYSLPIHKSIRTKPERVQYLHCRPQNSTSISCSWAPPEADYDSYTIECLHRDS
RTLVYSRRTGRDSTLYHITQLEPHKRYTVSIKAISDSMTSEAAEDSVVTMIDLPPLPSLS
TRVNNRAALITKNTIFFKFNCSWFSDVNGAVKFFTVVVTESV
NT seq
3367 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgtcattgatggcagcgctatgaagattacatggtcgccccctagaggggac
cgggagaactatcgtgtcctgctactgaatggcacagtggctctactcaatgagacagtg
agcaggctgggtagacagtactccttctctggggcttccttggggctggtgcctggcagg
ctctacacagctcaggtcatggtggagagcggtctgtttggcaacaccgctcaatgtcag
gggaggctagcccctcggcctgtccagcagctggtggtccgacacagtgatgagacgtct
ctgagcgtgctttggtctcgtccagagggggtgtgggacgggtacaccgtggtcttgaga
caggcggacactgttgtgtcacagaggacactgtcccgtgacgtcagggagtgcacattc
aacgtcctcatgcccggacgccagtacgccatcgccgtcacgaccaacagtgggggccta
aacagctcggcttcagtgattggacgaactaccccggcgcaggtgaccagtctgcgtgtg
accaatggtggtagcacagacagcctccaaacccagtgggagcgggcggctggcgagctg
gactcgtaccgtgtgctgctcatccacgacagcagtgtgatcaagaacgagagcacctcg
gcccacaccacagcctacagcttcctggcgctgaagcctggagccctctacagggtggtg
gtcatcactgtcagggccggacaggcctccaggcagagtgtggcagagggacacacagac
cctgctgccgtaggtgtggtgacagtcagtaacaacggtcgtatggacttcctcagtgtg
tcgtggcgaccagcccaaggcgacgtggatagttacctggtcaccctgagggaccgtgag
aggaccgtccacaccctggttgtgtccaagtccagccctgagtgtgtgttcaagtccctt
gtgtctggacggctctataacatctctatcatctcccgcagtggagtctatgagaatcac
accatcgtgcaggaacgcacacagccctctagtgtccaaaaccccacagcgatccactcg
gccagggatgactacctgaaggtgtactggcgccatgcagccggggactttgattactac
caggtggtcatcaaacacaacaacatcttccaccagaacaagacggttatgaagagccag
aacaagtgtgtgttcaaaggcctggtccccgggagactgtacaccgtcatcgtcagcacc
tggagcgggaagtatgagaccagcatgtccacagacggaaggaccttccctgcggcggtg
agatcactagccctggctgggcggggcacggaggaccttcgtgtcacctggttggctgct
ccgggggacgtggatcactacgaggtgcagctcctcttcaacgacatgaaggtgttcccg
cccatcaccctgggcagcaacgtggggaagtgtgtcctttcctccctcaccccaggacgc
ctctataagatccacgtttccaccttcagcggacccaaccagagggcccagttcatagag
ggcaggacagttccgagcaaggtcaagaacatccacgtaagcaacaatgggcagagcaac
agcctgaagatcagctggaccccggggcagggtgacgtggacagctactctgtgtccctg
tcactggacgggccagagggacgcatgctggagacgcgacccgtacccaaacacctgaat
cagctggggttcagctccctgcagcctggacagctgtacagtgtgactgtaaggtctatc
agtggtatactgttgaacaacaacacggccagcggacgcaccgtcccctctgcagtgacg
ggcctgcaggctgacaacagacacaccacctgcagtattcaggtcagctggcaggaggcc
cggggcgtggcggacggctacagcctgcagctgctggacgacaggggacacctggtcacc
aacagctcccaggcctcctccgggtccacaccgctccagcaccatttcgacggcctcacc
ccggggaagaggtaccatatcctggtccacaccaccagcggaggggtccacagcgaggag
gtcaccactgaagcacgcacgcgtccggcggcggttagcaacctctccatccaggccaac
agcagcagcagcctgtccttccactggtctcccccagagggagagttggaaggttacgac
ctctacctgtacaacggagacgacaccctgtacgaccggcgcagcggcctgcccaacacg
ctgcaggtctccttccagggcctgaggcctggtgtctcctacaggatggtggtgttaaca
cgcagcggagagcagaccaacgacatagctatctgggccaggactgtcccggctgcagtg
acgtctcttcaccagtcggaggtgctgtgggtgtcgtgggagcgtgcagcgggggagctg
agcggctacttgctgtctgtctacaacccagatggctcccagcaggcagaggagtctcta
gggcccgacgccacggagcatgccgtccccactctgatccccgggcgcctataccatgct
gtcatcctcacccgcagtggcgagctcacaaacagggccaccactcagggcaggaccgcc
cccagaccccctacctctgtgtcattcggcggggtcaccaacacttcactggaactgaac
tggagtggtcctgcaggcagcgactacgacgactttgacctgcagtgggccccccgggac
cacctgtctgtgttcaacccctaccacacccggacctccggcagccgcatccttaagggc
ctgtaccccggacgcctgtacaacttcagcctgcgtactgtcagtggggctgttcgtggt
gttggtgaggatgggagccctgcctacagcctgcccatccacaagagcatccgaaccaag
ccagagcgtgttcagtacctacactgccgcccccagaactccacctctatctcctgctcc
tgggcgcccccggaggctgactatgactcctacaccattgagtgcctccaccgggactcc
cgcaccctggtgtactcccggcgtacgggccgcgacagcaccctctaccacatcacccag
ctggagccacacaaacgctacaccgtctccatcaaggccatctccgacagcatgactagc
gaggccgctgaggatagcgtggtcaccatgatcgacctccctcccctcccttccctcagc
acccgtgttaacaacagggctgctctcatcaccaaaaacaccatcttcttcaagtttaac
tgcagctggttcagtgacgtcaacggagcagtcaagttcttcacagtggtggtgaccgag
tctgtag
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