Coregonus clupeaformis (lake whitefish): 123489416
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Entry
123489416 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: putative tyrosine-protein phosphatase auxilin
KO
K09526
DnaJ homolog subfamily C member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123489416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
123489416
03110 Chaperones and folding catalysts [BR:
cclu03110
]
123489416
04131 Membrane trafficking [BR:
cclu04131
]
123489416
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123489416
Chaperones and folding catalysts [BR:
cclu03110
]
Heat shock proteins
HSP40 / DNAJ
123489416
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
123489416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Motif
Other DBs
NCBI-GeneID:
123489416
NCBI-ProteinID:
XP_045075947
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
GSSKTGLPLLGSKAMSSLLGACVQYGIREALLPHSKPLVVKAVTMSPVPCFNKQRHRLQT
ILYLSHPLFLREHRVQEGKVVFPLGVNVQGDVVISVYHMRNTIGDRLQAKVSNTQILQIQ
FHTGFIAPGTTVLKFTKPELDACDSPEKYPQLFHVLVDIEVESTDKQKDLTPPWEQFPNK
DLIPNVLFSCHQEHQDALAIAEPSRSHSGSDGRPHGEDSEPSDDEMLSLSSQQSNASGER
PGGAQSGPRGPKRPEQPQAPATAPPPPEEVDLLGLDGAAVNPPAPSPQPPHHQHYHGPPG
GSVWSLSPAPAWEWARLSPVYPPENSPSLHLPCPSPGIELNSKVMVYAFLSAHPAFDPFG
AGPMPKPQELMGSFRGPAGNHGNLGLPAPLLHAARSPSSTMQNTGMGRSSPVPPTTPVVT
IQQPPNAMGGWDWNKSAAPGGGFGMGSKSASTSPTGSVHSTPTHQAKPKTLDPFADIGNL
GGSLGGGSGISSKPTTPTGTTPAFPPMGSPSRPPPSPQHGGGWQANTGFPSWQPGGGGQA
GWQPQPQGQGGPPSQPKPSPSHSMPHTSLQQTQLQHQLLCHGRRGCSQCTRGKPQPNMGT
KPKVATANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAKEMDPEKLKILDWIEGKERNI
RALLSTMHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMI
FMELNDAWSEFDSQGQKALY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ggatcctctaagacgggcctgcctttgctcggctccaaggccatgtcctctctgctggga
gcttgtgtgcagtatggtatcagagaagccctcctgccccactccaagcccctggtggtc
aaggcggtcaccatgagtccagtaccctgcttcaacaaacaacgacatcggctgcagacc
attctctacctctctcatcccctctttctcagagagcacagggtccaggaggggaaggtg
gtcttccctctaggtgtgaatgtccagggtgatgtggtcatctctgtttatcatatgagg
aacaccataggagaccgactgcaggccaaggtgtccaacacccagatattacagatccag
ttccacacaggcttcatcgctccagggaccaccgtgttaaagtttacaaagccggagctg
gatgcgtgtgactctccagagaagtacccccaactgttccatgtgttggtggacattgag
gtggagagtacagacaagcagaaggacctgacccctccctgggaacagttccctaataaa
gacctgatccccaacgtactgttctcatgtcaccaagagcaccaggacgcccttgccatc
gcagagccgagccggtcccacagtggttcagatggtcgccctcacggggaggacagtgag
ccgtctgatgatgagatgctgtccctgtctagccagcagagcaacgctagcggagagaga
cccggaggggcccagtctggccccaggggccccaagagacctgagcagcctcaggcccct
gccactgctcctcctcccccagaagaggtggacctcctgggcctggatggggctgctgtg
aacccccctgccccctcgccccagcccccccaccaccaacactaccacggacctcctggg
ggatctgtttggagcctctccccagcccctgcctgggagtgggcccgcctcagcccagtc
taccccccagaaaatagcccctccctccacctcccctgcccctctccaggaattgaattg
aatagtaaagtaatggtttatgcttttctctctgcccacccagcattcgacccatttggg
gcgggtccgatgcccaagccccaggagctgatgggttccttccggggtccagcaggtaac
catggtaacctggggctgcctgcccccctcctgcatgcagctcgctctccatcctccact
atgcagaacactggcatgggccggagctccccagtcccgcccaccacccctgtggtcacc
attcagcagcctcccaacgccatgggaggatgggactggaacaaatctgcagctccagga
gggggtttcggtatgggcagtaagtcagccagtaccagtcctaccgggtcagtccacagc
acacccacacaccaggccaaacccaagaccctggaccccttcgctgatatcggaaacctg
gggggcagtctgggaggaggctctggcatctccagtaagcccaccacccctacaggcacc
acccctgccttcccccccatgggctccccctcacggcctcctccctcaccccagcacggt
gggggctggcaggctaacacaggcttcccctcctggcagcccggtggtggagggcaggca
gggtggcagccccaaccccaaggtcagggtggcccaccgtcccagcccaaacccagcccc
agccactccatgccccacacctccctccaacagacccaactacaacatcagcttctctgc
catgggaggaggggctgctcccaatgcacccgggggaaaccacagcccaacatgggtacc
aagcccaaagttgcaacggctaactttgatgacctgctgtctggccaaggctttgctgga
gccaaaaagaaggaaggtcccaggacaatagcagagatgaggaaggaggagatggctaaa
gagatggaccccgagaaactcaagattctggactggatcgaggggaaggagcgtaacatc
cgggccctgctgtccaccatgcacacagtactctgggagggggagacccgctggaagcct
gtaggcatggctgacctggtgaccccagagcaggtcaagaaggtttaccgcaaagcagtg
ctggtggtccatccagacaaggccacgggacagccctatgaacaatatgccaagatgatt
tttatggaactgaatgacgcctggtcagaatttgacagccaaggacaaaaagcactctac
tga
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