Coregonus clupeaformis (lake whitefish): 123490211
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Entry
123490211 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123490211
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123490211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
bHLH_HIF1A
HLH
bHLH_NPAS4
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
123490211
NCBI-ProteinID:
XP_045076242
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MYAGRKRRKPVQRGIEVKDQKEKKTAPSEGTKSNPSKRHRDRLNSELDRLACLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTHACKGLKANGGNHDNSKTAGLVDGWMPEGEL
LLQALNGFVLVITAEGVIFYSSHTIQDYLGFHQTDVMHQSVFDLIHTEDQQEFRRNLHWA
LNPPAVSQQVESPPDGKPVPSSSLVTYNPDQLPPENSSFLERSFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNYRLDDGCNMPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWKWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQAKGKTKSKKGKLDKNSSKDNGGLDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSEQDEGEGQSSGGYSGGPLAGGGGESWSTVPNRVTTTSTGPNGEPPSSFDP
LLATLDSLALEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDLDYIPSLNDL
LTNNEILSYIHDSLENRTEEGQGVDSHVSIPQPSPSTTTHPPGPIPNYALITNSHTQATP
TMHISTLHPQATNPSAPQPTLPAQLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLVKYPWP
PTQTDVPTPSQPDTLQHTNSLTVVHNGHWLPQQQLTHAGLDDHCHSLHPLVNGKTSQLGP
HVAGQLKHHQHQNNIHQSQQEWQQQNQHLQVQLQSQSQCHFKQQKASSCGSATLNGVHPD
PHWQSYGYNDQLGLTTNGANGACTVSYPNGHGDTLSHTTGGEVTHMDYGMGDSTTVGLVM
NRGTVGGIDHYQEQGGVTATPSDHLVHHKQHHPQVPSTYFPHQCPTTQNSLDYILGLSQP
HHTMPTLDAYGILNSPASQDATCCKMENGCIRNNTKVAYTGSCLLPNVNGQTASDSLHPH
PEALQTLPTLLDLQTTGFYL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaagaggcatcgaagtgaaagaccaa
aaagagaaaaagacagctccatctgaagggaccaagtctaacccatcaaagcgccaccgg
gaccgtctgaactctgagttggatcgtctggcctgtctactgcccttcccagaagaggtc
acctccagcttggataaactctctattttacggctcagtgtgagctacctgaggactaag
aacttcttctcagttgccctgaagacccacgcttgcaaggggttgaaggccaatggtggt
aaccatgacaacagcaagacagcgggattggtggatggctggatgcccgagggtgaactc
ctattgcaggcccttaatggttttgtcctggtcatcactgcagagggggtcatattctac
tcctctcacaccattcaggattacctgggattccaccaaacggatgtgatgcaccagagt
gtgtttgatctgatccacactgaggaccagcaggagtttaggaggaacctacactgggct
ctcaaccctccggccgtgtcccagcaggtggagtcacccccagatggaaagccagtcccc
agctcatccctggtgacctataaccccgaccagctgcctccagagaactcctccttcctg
gagaggagcttcgtctgccgcttccgctgtctcctcgacaactcctctggcttcctggct
ctgaccctccagggtcgtctgaagttcctgcatggccagaactaccggctggatgatggc
tgcaacatgcccccccagctggccctgtttgccatcgctacccccctccagcccccatcc
atcctggaaatcaggaccaagaatatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgatgccaaggggaagatcgtgctgggctacactgaggctgagctccgg
gtccgaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgatcaagacaggagagagtgggctgacggtgttcagactgctcactaag
gataaccgctggaagtgggtccaagccaacgccaggctggtctacaagaacggcaagcct
gactacattatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagg
aagcgttccatgcacctccccttcaccttcgccacgggcgaggcccttctctaccagagt
agctaccccatccatggcctcaccgactcactccaggctaaaggcaagaccaagtccaag
aagggcaagctggacaagaactcgtcgaaggataacggtggactggaccccagctccctg
ctcggggcgctgatgaggcaggatgagtctgtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgagcaagacgagggggaagggcagagcagt
ggaggttatagcggtggccctctggctgggggtgggggagagagctggagcaccgtgccc
aacagggtcaccaccacctccactggccccaacggggagcctccgtccagcttcgacccg
ctgctcgccaccctggactcactagctctggagggggacgagacatgctctaacagcgag
ctgttctctgctctggagaacctgggtctgaacgcggaggatctggagctgctactgcta
gatgagaggatgatcagagtggagatggatctagactacatcccctcgctcaacgacctg
ctcaccaacaacgagatcctctcctacatccacgactcgctggagaacaggacagaggag
ggccagggtgtggacagccacgtgtccataccacaaccctcaccctcaaccacaacccat
ccccctggccctatccctaattatgcccttatcactaactctcatacccaagccaccccc
actatgcatatctctaccctccacccccaggctactaacccttctgccccccaacctacg
ttacccgctcagctaccccctcacagactaccaaagcagccacccatagtgcagctctcc
cagcagatgcagcagcacctcaacttagtaaagcccgttctggtaaaatacccctggccc
ccaacacaaacggatgtccccacgccaagccagccagacacactgcagcacacaaactcc
ctaaccgtggtccataatggtcactggcttccccagcagcagcttacgcatgcagggcta
gatgaccactgccacagccttcaccccctggtcaatggtaagacatcccagctggggcct
cacgtggccgggcagctcaaacaccaccagcaccagaacaacatccatcagagccagcag
gagtggcagcagcagaaccagcacctacaggtccagcttcagtctcagtctcagtgccat
ttcaaacagcagaaggctagtagctgcggcagtgctactctcaacggggtgcaccctgat
ccccattggcagagttacggctacaacgaccagttgggactgacaactaatggagctaac
ggagcctgcaccgtctcctaccccaacgggcacggggacaccctctcacacactacagga
ggggaggtcactcacatggattacggtatgggtgattcgactaccgtgggcctggtcatg
aacaggggtacagtagggggcatagatcactaccaggaacaaggaggggtgactgctacc
ccctcagaccatctggtgcatcacaaacaacatcatccacaggtcccatccacctacttc
ccccaccagtgccccaccacacagaactccttagattacatcctgggactatcacagcct
catcacaccatgcctactctggacgcctatggcattttgaacagccccgcttcccaagat
gccacttgctgcaagatggagaacggctgcatccgcaacaacaccaaggtggcctacaca
gggagctgtctactgcccaatgtgaacggccagacagccagcgacagtctccacccccac
cctgaagccctacagaccctgcccaccctcctggacctacagactactgggttctacctc
tga
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