Coregonus clupeaformis (lake whitefish): 123491064
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Entry
123491064 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
123491064
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
ROBO family
123491064
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Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
Toxin_19
Motif
Other DBs
NCBI-GeneID:
123491064
NCBI-ProteinID:
XP_045076879
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All DBs
Position
6:25917601..26030102
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AA seq
1034 aa
AA seq
DB search
MALFRAVFDPPPEGREGSERLFQLQQDTQTAAEYALTFRTVAASSGWNELALRMLFHSGL
HKEVQTECWDDNISLDAFIAMAIHVDNLLQERRCPPRHSPPSFGCPEREPEPHHLLVEDE
NHHLRTRMPEDLLFRTLWFHVGGGSYLVCLGNESRYHINRISVDRLTFSLLIPSLAPGIR
YSVEVGASTGAGPGVKSDVTFFQIDSSGRMTEGVVDSENTLSQQISDVVKQPAFIAGIGA
ACWIILMVFSIWLYRQRKKRSGLSTNYAGIRKVPSFTFTPTVAYQRGGEAVSSSGRPGLL
NIGESATQPWLADTWPNSCSNHNDCSMNCCTAGQGNSDSNLATYSRPADCIANYNNQMES
KQTNLMVPEGGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATTQLIQSSILG
NNINTDRDRGSGGGGGGGGEINEKHGWKPTPVQLQKQQEMTSQLHQYNIMEQNKLNKDHY
RGGDSPMPTTIPYNQAHEAHTVGSYNSSDRGSSSTSGSQGQKKGVRTPKQPKQSTMNWAD
LLPPPPANPPPCRNMEEYSLSMDESYDPDMHCSLPPSRMYLQPDELEEEDEDKEEEEMER
GPTPPIRGAASSPAAVSYSHQSTATLTPSPLEDLQPMLQDTPDSMGSGHERRRHAVSPPP
RPLSPSHTYGYISSPLALDTDGMEEQEMLEEEEEEDGDETDAEVAKVHHHPHHPHHPQQM
HPRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTD
ADFAQAVAAAAEYAGLKVAKYPNPTQGQEGGPGARKYQMTPSGHRPGSPLSTDSNMSTAN
MQKRPPKKQKQHTAAGLPGLQRREAYPEDLPPPPIPPPAGLKSPTHPSKTALEARGIMSP
KAGEGRDRRGGSGGGYRPREGSDPRTSSSERRETQDRQKIPRTGKGNKQEGSSTKARQHP
GPEDILPYSRPSFPTVHSPRDRDPSSSSSMSSRGSGGRRRGEGGPGARRNPNDMGLNTMG
AFQPGDDDLEMVES
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggctctgttcagggcggtcttcgaccctcctccagagggcagagagggaagtgagcga
cttttccaactccagcaggatacccagaccgctgcggagtacgccctcacctttcggact
gtggcagcctccagcggatggaatgagctggcgctccgcatgctattccacagtggactg
cacaaggaggtccagacagagtgttgggatgacaacatatccttagacgctttcatcgcg
atggccatccatgtggataaccttcttcaagagcgccggtgtccacctcgccactctcct
ccctcctttggctgtcctgagagagagcctgaaccccaccatctcctggtcgaggatgag
aatcaccacctgcggaccaggatgccggaggacctgcttttccgtaccctgtggttccac
gttggtggaggatcctatctggtatgtttgggtaatgagagcaggtaccatatcaaccgt
atttcggtggaccgtctaaccttctccttgctgatccccagcctggctccagggatccgt
tacagtgtggaggtcggagccagcactggggcaggcccaggggtcaagtctgatgtcacc
ttcttccagatagactcatcggggcgtatgacggagggtgtggtggactcagagaacact
ctgtcccagcagatcagtgacgtggtgaagcagccggccttcatagcggggataggagca
gcctgttggatcatcctcatggtgttcagtatctggctctaccgacagcgcaagaagagg
agtggcctcagcactaactacgcaggcatccgcaaggtgccatcctttaccttcactcct
acagtggcgtaccagagaggtggagaggctgtcagcagttcaggaaggccaggtttgctg
aacattggggagtctgctacccagccctggttggctgatacctggcccaactcctgctcc
aatcacaacgactgtagcatgaactgctgcaccgcaggacagggcaacagtgacagcaac
ctggctacatacagccgcccagccgactgcatcgccaactataacaaccagatggagagc
aaacagaccaacctgatggtgccggagggaggagtgtacggagacgtggacctctccaac
aagatcaacgagatgaagactttcaacagccccaacctgaaggacggacgcttcgtaggg
ccgggtggacagcccaccccctacgccaccacacagctcatccagtcgtctatcctggga
aacaacatcaacacagacagagacagagggagtggagggggaggaggagggggaggggag
ataaacgagaaacatggctggaaacccaccccggttcagctgcagaagcaacaggaaatg
acctcacagctccaccagtataacatcatggagcagaacaagctaaacaaggaccactac
agaggaggggacagtcccatgcctaccaccatcccctataaccaggcccacgaggcccac
accgtgggctcctacaacagctctgaccgcggcagcagcagcacctccgggagtcaaggt
cagaagaagggagtgcgtacccccaaacaacccaaacagagcacaatgaactgggctgac
ctactgcctcctccccctgctaacccacccccctgccgcaacatggaggagtactccctg
tccatggacgagagctatgacccagacatgcattgctccctgcccccctcccgcatgtac
ctgcagccagatgaactggaagaggaggatgaggataaggaggaggaggagatggagagg
ggtcccactccccccatcagaggggctgcctcgtcccccgccgcggtgtcctacagccat
cagtccacggccaccctcaccccctcgcccctggaggacctgcagcccatgctccaagac
acaccagacagcatgggctctggacacgagcgcagacgccatgcagtgagcccccctccc
cggcccctctccccctcacacacctacggctacatctcaagccccctggctctggacaca
gacggcatggaggagcaggagatgttggaggaagaggaggaggaggatggggacgagaca
gacgcggaggtggccaaggtgcaccaccaccctcaccacccccaccacccccagcagatg
caccccaggaggctgctgctacggggcctggagcagacgccagcctccagcgtgggggac
ctggagagctctgtgacgggctccatgatcaacggctggggttcggcctccgaggaggac
aacgcctcttcaggacgctccagcgccgtcagctcctcagacggatccttcttcacagac
gccgacttcgcccaggctgtggccgctgctgcagagtacgcaggcctcaaggtggccaag
taccccaaccccacgcaaggccaggagggaggccccggagcacgaaagtatcaaatgacc
ccttcaggccaccgtcctggcagccccctgtccacagacagtaacatgagcacggccaac
atgcagaagaggcctcctaagaagcagaaacagcacactgcagcgggccttccagggctc
cagcgacgagaggcctaccctgaagatctgccccctccccccatcccccctccagcgggg
ctcaagtcccccacacacccctccaagacagccctggaggcccgggggattatgtccccc
aaggcaggcgagggcagggacaggagagggggctcaggaggagggtaccggccacgggag
ggatcggacccccgtaccagctcctcggagcgccgggagacccaggacagacagaagatc
ccccgcacagggaaagggaataaacaggaggggagcagcaccaaggcacgccaacaccca
ggaccagaggacatcctgccctacagccgcccctccttccccacggtccacagtccccga
gacagggaccccagctcctccagctccatgtcctcccggggctcagggggccggcggaga
ggagagggggggccaggggcccgcaggaaccccaacgacatgggcctcaacaccatgggg
gccttccagccaggagacgatgacttagagatggtggagagctga
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