Coregonus clupeaformis (lake whitefish): 123491229
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Entry
123491229 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF25-like
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
123491229
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123491229
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123491229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_11
zf-RING_2
zf-C3HC4_2
VPS18_RING_C
zf-ANAPC11
DUF1644
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123491229
NCBI-ProteinID:
XP_045077313
LinkDB
All DBs
Position
7:34537903..34540454
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AA seq
439 aa
AA seq
DB search
MNIKYLTRSLFSFLCLSQKAKDILTESNIPHGNCVICLYGFKDGEAFTKTRCYHYFHSHC
LGRYITHSETELQEREKELEQDKTRRGXTMRXDQELTVVCPMCREPLIYNVDQLLSNPAP
SFPKLEGVVIGVAFRQKWAELQNLLERQKAKGGIINTEAESNRFLIHINEPPPDSDNVSA
DGDASPSQSLPSLPPASTNQITAPQLQHAGHSHRRGGPGHQCRHQGPQGHFRGPRRGGRG
RPHTHPGRPVPPTDHLDKLSLSSEKHDKFHSAPPANSHDATIKARLQENSSHPELGQAQL
SQLEKEEGEGRTELGQQEAPVPKDGQPISKSSLDTSKTDIPPSNGMEMEAGRGHRERGRR
GPRRSAQQPDQWQERHFRGTDQWDARGGGYHRYWNGRGQQSRGGANCPRSREGGAHMAGG
RGFHQRVVEGEVGREGAAL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaagtacctgactcggtccctcttttcttttctctgtctctctcagaaagcc
aaagatatcctgacggagagcaatattccccatgggaactgcgtcatctgcctttacggg
tttaaggatggggaggcgttcaccaagaccagatgctaccactacttccactcccactgc
ctaggccgctacatcacccactctgagactgagctccaagagagggagaaggagctggag
caggacaagacacggagaggatagacgatgaggtgagatcaagagctaacggttgtgtgt
cccatgtgtagagaacctctgatttacaatgttgaccagctcctgtctaatcccgcccct
agctttccaaagctggagggagtggtgataggggtggcgttccggcagaagtgggctgag
ctccagaaccttttggagcgtcagaaagcaaaaggcgggattatcaacacagaggcggag
tctaaccgcttcctcatacatattaatgagccgcctcccgactccgacaacgtcagcgct
gacggggacgcctctcccagccaatcactgccctcccttccccctgcctccaccaatcag
atcacagcaccacagctgcagcacgctggccactcgcatcgcaggggagggccaggtcac
cagtgccggcaccaggggccgcagggccacttcaggggacccaggaggggagggagaggc
aggccccacacccacccagggagacctgtcccccccaccgaccatctggacaaactctct
ctgtcctcagagaaacatgacaaattccacagcgctcctcctgccaactctcacgacgca
acaatcaaagccagacttcaggagaactctagccacccggaactgggacaagcacagtta
agccaattggagaaggaagaaggggagggacgtacggagctaggccaacaagaggctcca
gttcctaaagacggtcagccaataagcaaatcaagcctggacacttctaaaacggacatc
ccacctagcaacggcatggaaatggaggctgggcgaggccatagggagaggggaaggagg
ggccctcgccgttcagcgcaacagcctgaccaatggcaggagaggcatttcagaggaacg
gaccaatgggatgctcgggggggcgggtaccatcgctactggaacgggcgaggtcagcaa
agcaggggaggtgccaactgcccccgtagcagagaaggtggggctcacatggctggtggg
aggggcttccatcagagagtggtagagggagaggtggggagagagggtgctgctctatga
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