Coregonus clupeaformis (lake whitefish): 123491234
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Entry
123491234 CDS
T08357
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123491234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
123491234
Spliceosome [BR:
cclu03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
123491234
Complex B
123491234
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GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
123491234
NCBI-ProteinID:
XP_045077324
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All DBs
Position
7:35351887..35367076
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AA seq
496 aa
AA seq
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MTQFLPPNLLALFAPRDPIPFLTQLEKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETRDERLERKRREKIERRQTVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIYIVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGKRVLVDVER
GRTVKGWQPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDHPPIGGERERERGPEPRGE
RRERSRERERGGEKERGGERRRSRSRERRRRSSRSRERERGDRGLGLAVPGEESVGGSRR
RDRERERGGGGPGGDSRSRERSRDKGERKKRSRSRERKRDRERGKGGEGDEGMGLGEGMM
GEGGERMPEEPSVGEEGGEVGEERGGRERDRDRRRSHRDKDRDRDRERHRGDREKDREHK
RDRERGGGERREDRHGSLLLPSAKQDDVGNGEEGDAPPKPEENSQDGLMDQESVQSGEGY
VSNENGYKMETQADEY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttttaccccccaacctgctggccctatttgcgccgcgggaccccatacca
tttctgacgcagttggagaagctgccccatgagaaacaccacaaccagccatactgtggc
attgctcccttcatcaggcactttgaggaccccagagatgcccctccccctactagggca
gaaactcgtgatgagaggttggagagaaagaggagggagaagatcgagaggcggcagacg
gttgtggagacagaactgaagctctgggatccacacaatgaccccaatgctcagggggat
gccttcaagaccctgtttgtggctcgcgtgaattatgacacaacagaatccaagcttcgc
cgtgagtttgaggtctacggccccatcaaaaggatttacatcgtctacaacaagcggtca
gggaagcccagaggatacgccttcatagagtacgagcacgagagagacatgcactccgcc
tacaagcatgcagacgggaagaagatcgacgggaagagagtgctggtggatgtggagaga
ggccgcactgtgaagggatggcagccccgcaggctaggtggtggtcttggtgggacgagg
agaggcggggctgacgtcaacatcaagcactctggaagagatgacgcctcacgttacgat
gaccaccccccaattggaggggaacgagagcgcgaacgtggacctgagcccagaggggag
cgcagagagcgcagccgtgaacgcgaacgggggggggagaaagagcgcggtggcgagaga
cggaggtcccggtcccgggaaagacgcaggcgcagctcccgctccagagagagggagagg
ggtgacaggggtctgggcctggcagtgcccggagaggagagcgtagggggtagcaggagg
agagaccgagagagggagcgggggggaggagggccagggggagacagtcgtagcagggag
aggagcagagacaagggcgaaaggaagaagaggagccgcagccgagagcgcaagcgagac
cgggagagaggcaagggtggcgagggggatgagggcatggggctaggagaaggtatgatg
ggggagggaggagagaggatgcctgaagagcctagtgtgggtgaggaagggggagaggtg
ggagaggagcgcggcgggagggagcgggaccgtgaccggaggcgcagccacagggacaag
gaccgcgatagggaccgggagaggcacaggggggatagggagaaagacagggagcataag
agagacagggagcggggtggcggggagcgcagggaggaccggcatggctctctcctgctc
ccctcggccaagcaggatgacgtgggtaacggggaggagggcgacgcgccacccaagcca
gaggagaacagccaggatgggttgatggaccaggagtcggtgcagtcgggggagggctat
gtttccaacgagaacggctacaagatggagacccaggcagacgagtactaa
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