Coregonus clupeaformis (lake whitefish): 123491468
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Entry
123491468 CDS
T08357
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123491468
04121 Ubiquitin system [BR:
cclu04121
]
123491468
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
123491468
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123491468
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
123491468
NCBI-ProteinID:
XP_045078191
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Position
8:complement(35047326..35048935)
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AA seq
384 aa
AA seq
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MFSQRLGQNSARAKNITATIAKFICKDMRPYSVVENPGFREMIQTLEPRYTIPSRPHFSE
KVIPALYESTKNDVKLSLSQAERVAITTDGWTSCSNQGYVTITSHHIDPEWKMKTFVLLT
RVLNEAHTGKNIGALLREACMEWKIYDKNPAIVTDNARNMIVAGAEAQFSPHITCFAHTL
NLASQKGLGVDRASRLLGKVRKMVGYFHRSPIACHALQEKQTLMDLPKHKLIQDIITRWN
SSFEMLERFLEQQPAIMATLMSKDLRKGVTDVGTLSESDIANMDDIVQLMGPVKMATTVM
CEEDQPTLSVIAPLQAKLLKHLQPCEDDSTLVAEIKRVMASDLSTRYRGTQDALNIASAL
DPRFKELPYLEKRGQRTGLHKTGF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtcagagactaggccaaaactcagctcgggcgaaaaacatcacggcaacaatt
gccaagtttatctgcaaagacatgcgaccctacagtgtggttgaaaatccgggattccgt
gaaatgattcaaacattggagccaaggtacacaataccaagccgaccacacttctcagaa
aaggttattcctgcattgtacgaaagtactaagaatgatgtgaagctgtcgctttctcaa
gctgaacgagtagcgataacgacagatggctggacgtcatgctcaaatcaagggtatgtg
acaattacctctcatcacattgatccggagtggaaaatgaagacctttgttctgctaacc
agagttttaaatgaagcccatactggtaaaaatattggcgcgttactgcgtgaagcctgc
atggagtggaaaatctacgacaagaatcctgccatcgtcacagataacgccaggaatatg
attgtggccggtgcagaagcccagttcagtccacacattacctgcttcgcacatacactc
aaccttgcctcgcagaagggtttgggggtggaccgtgcttccaggttgttggggaaagtg
cgaaaaatggttggatattttcaccgcagcccgattgcatgtcacgccctacaggaaaaa
caaactctgatggatttaccaaaacataaactgatccaagacataatcaccagatggaac
agttcattcgaaatgcttgaacgttttttggaacaacagccagctataatggcaactctg
atgtccaaggatctacgaaagggggtcacagatgtaggcacgctgagtgagagtgatatt
gccaacatggatgacattgttcagttgatgggtcctgtcaaaatggcaaccactgtgatg
tgtgaagaagaccagccaactctctctgtaattgctcctcttcaagcaaaactgctgaaa
cacctacagccatgcgaagacgactcaaccctggttgcagagattaagagggtgatggcc
agtgacctctccacacgctacagaggcacccaagatgctctcaacatagcatcagcgttg
gacccgcgatttaaagaactgccctacctggaaaaaagaggacagagaacaggtctacac
aaaactggtttttga
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