Coregonus clupeaformis (lake whitefish): 123491660
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Entry
123491660 CDS
T08357
Name
(RefSeq) short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like
KO
K09478
short-chain 2-methylacyl-CoA dehydrogenase [EC:
1.3.8.5
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00071
Fatty acid degradation
cclu00280
Valine, leucine and isoleucine degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
123491660
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
123491660
Enzymes [BR:
cclu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.5 short-chain 2-methylacyl-CoA dehydrogenase
123491660
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
ACOX_C_alpha1
Stanniocalcin
Motif
Other DBs
NCBI-GeneID:
123491660
NCBI-ProteinID:
XP_045079215
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Position
1:89516833..89531372
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AA seq
332 aa
AA seq
DB search
MGIEIDPEYGGTGSTFFSSILVIEELAKVDASVAVLCDIQNTLINTLFAKLGTAAQKEQY
LSRLSTDMVGSFCLSEAESGSDAFSLKTRADKHGDYYLINGSKMWISNAEHAGVFLVMAN
VDPSAGHRGITCFIVDRDAEGLQIGKKENKLGLRASSTCPLNLDNIKVPEKNILGQIGHG
YKYAIGMLNEGRIGIAAQMLGLAQGCFDQAVPYTRQRVQFGKRIFDFQAMQHQIAHVATQ
IEAARLLTYNAARLKEAGRPFIKEACMAKYFTSEVATLTTSKCIEWMGGVGFTKDYPIEK
YYRDCKIGTIYEGTTNIQLSTMAKFIDKEYDY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgagatcgacccagagtacggaggcaccggctccacgttcttctcctccatc
ctggtcattgaggagctggccaaggtggacgcctccgtggccgtgctatgtgacatccag
aacaccctcatcaacacgctcttcgccaagctggggaccgcagcccagaaagaacagtac
ctcagccgactgtcaacagacatggttggtagtttctgcctgtcagaagcagagtcgggg
agcgatgccttctctctgaagacgcgcgctgacaaacacggggactattacctcatcaat
ggttccaagatgtggatcagtaatgcagagcatgctggggtgtttctggtgatggccaac
gtggacccgtctgctggtcacagaggcatcacctgcttcatcgtggacagagacgcagag
gggcttcagatcggcaagaaggagaacaaactgggtctgagagcttcttcaacctgtcct
ctcaacctggataacatcaaggttcctgagaagaacatcttgggtcagatcggccacgga
tacaagtacgccatcggcatgctgaatgaaggcaggattgggatcgctgcccagatgctg
ggattggctcagggctgcttcgaccaggcggttccctacaccagacagagggttcagttt
ggcaaacgcatattcgacttccaggccatgcagcaccagattgcccatgtagccacccag
atagaggctgccaggctgctgacctacaacgctgcccggctgaaggaggcaggaagaccc
ttcatcaaggaggcctgcatggccaagtacttcacctcagaggtcgcaacgttgaccaca
tcaaaatgcatagagtggatgggaggggtaggcttcaccaaagactaccctattgagaaa
tactacagagattgtaaaataggtaccatttatgagggcacaaccaacatccagctgtcc
accatggccaagtttatagacaaggagtatgactactga
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