Coregonus clupeaformis (lake whitefish): 123492028
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Entry
123492028 CDS
T08357
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00020
Citrate cycle (TCA cycle)
cclu00640
Propanoate metabolism
cclu01100
Metabolic pathways
cclu01200
Carbon metabolism
Module
cclu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cclu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
123492028
00640 Propanoate metabolism
123492028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
123492028
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
123492028
6.2.1.5 succinate---CoA ligase (ADP-forming)
123492028
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123492028
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
123492028
NCBI-ProteinID:
XP_045079604
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All DBs
Position
12:6589766..6737694
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AA seq
432 aa
AA seq
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MAASMASQTVARGLRGASAKHLFLDKFKCARVSSRRWLNLQEYQSKKLMQESGVTVQRFY
VADNAPNALQAAKRLNAKEIVLKAQILAGGRGKGVFESGLKGGVHLTKDPSVVGELANKM
LGYSLTTKQTPKEGVKVKTVMVAEALDITRETYFAILMDRACNGPVMVGSPQGGMDIEEV
ADKTPELIFKEVIDIFEGVRDDQALRMAANLGFKGPLERQAANQIKRLYDLFLKVDATQV
EVNPFGETPEGQVVCFDAKINFDDNAEFRQKAVFAMDDMSESDPTETEAAKWDLKYIGLD
GNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKEKQVYEAFKLLTADPKVEAILV
NIFGGIVNCAVIANGITKACRELELKVPLVVRLEGTNVQEAKRILSESGLPIVAANDLED
AAKKAVAAIAKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccatggcatcccagactgtagcgagaggactacgtggagcaagcgccaag
cacttgtttcttgacaaattcaagtgtgcacgggtgagttccaggcgatggctgaacctg
caggagtaccagagcaagaagctgatgcaggagagtggggtgacagtccagcgcttctac
gtggctgacaatgcacccaacgcccttcaggccgccaagagactcaatgccaaggagata
gtcctgaaggcccagattctggctgggggacgagggaagggcgtgtttgaaagtggcctt
aaaggtggagtgcacttaactaaagacccctcggtggtgggtgagctggccaataagatg
ctaggctatagcctgaccaccaagcagactccaaaggagggagtgaaagtaaaaacggtg
atggtggctgaagccctggacatcaccagggaaacctactttgccatcctgatggaccgg
gcctgcaacgggcctgtcatggtgggcagtcctcagggtgggatggacatagaggaggtg
gctgacaaaaccccagagctcatatttaaggaagtcattgatattttcgagggggtgcga
gacgaccaggcgctccgcatggcagctaatttgggtttcaaaggacctctggagagacag
gcagcaaatcagattaagaggctctatgatctgttcctgaaagtcgacgccactcaagtt
gaagtcaatcctttcggtgagactcccgaaggacaagtggtgtgctttgatgccaagatc
aactttgacgataacgctgagttccgtcagaaagccgtctttgccatggacgacatgtca
gagagcgatccaacagagaccgaggcagccaaatgggacctcaagtacatcggcttggat
ggaaacatcgcctgctttgtgaatggggctggtctggctatggccacgtgtgacatcatc
gacctccatggagggaagccggccaacttcctggacctaggaggaggggtgaaggagaag
caggtgtacgaggcattcaaactgctcactgctgacccgaaggtggaagccatcctggtg
aacatcttcgggggcattgtcaactgtgccgtcattgccaacggcatcaccaaggcttgc
cgtgagctggagctcaaagtgcctctggttgtcaggctggaagggaccaatgtgcaggag
gccaagaggatcctgtcagagagtggactgcccattgtagccgccaatgacctggaagac
gctgccaagaaagctgtggccgccattgccaagaagtag
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