Coregonus clupeaformis (lake whitefish): 123492032
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Entry
123492032 CDS
T08357
Symbol
psmd6
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 6
KO
K03037
26S proteasome regulatory subunit N7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123492032 (psmd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
123492032 (psmd6)
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
123492032 (psmd6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
RPN7_PSMD6_C
TPR_2
TPR_16
Motif
Other DBs
NCBI-GeneID:
123492032
NCBI-ProteinID:
XP_045079620
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All DBs
Position
12:7720964..7726486
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AA seq
389 aa
AA seq
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MPLENLEEEGLPKNPDLRIAQLKFLLTMDGHRQDAKVKTELMDSIKENNMAPYYESLCKD
LKWQLDTDLLSKMKKANEDELKRLDDVLEDAEKNLGESEIRDAMMARAEYLIRIGNKEEA
LTAFRKTFDKTVALGHRLDIVFYLLRIGLFYMDSDLITRNTEKAKSLIEEGGDWDRRNRL
KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVCMIALKRPDLREKV
IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLATVEQDMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
SKNWQYQETIKKGDLLLNRVQKLSRVINM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggaaaatctggaagaagagggtctgcctaaaaaccctgatcttaggatagca
cagctgaaatttttgctcacgatggacggtcaccgacaggacgctaaagtgaaaaccgag
ctcatggactcaatcaaagagaataatatggcaccctactatgaaagcctgtgtaaagac
ctaaagtggcagcttgacacagacctgctgagtaagatgaagaaggccaacgaggacgag
ctaaaacgcctggatgacgtcctggaagatgcagagaagaaccttggggagagtgaaatc
cgagatgcaatgatggctagagctgaatatctaatcagaatcgggaataaggaggaagcg
ttgactgccttcaggaagacctttgataagactgtggccctgggacatcgactagacatt
gtgttctacctgctaaggattggactgttctacatggacagtgacctcatcacacgcaac
actgagaaagctaaaagccttattgaggaggggggtgactgggacaggaggaaccgtctc
aaggtgtaccagggcctgtactgtgtggcaattcgtgactttaaacaggctgctgagctc
ttcctggacacagtgtccaccttcacctcctatgagctcatggattacaagaccttcgtc
acgtacactgtctacgtctgcatgattgccctgaagaggcccgacctcagagaaaaggtg
ataaagggagcagagatcctggaggtgctgcacagtctccctgctgtccgccagtacctc
ttctccctctacgagtgtcgctactctgtcttcttccagtcactggccacggtggagcag
gatatgaagaaggactggttgtttgcccctcactaccgttactacgtgagggagatgcgt
atccatgcctacagccagctcctggagtcctaccgctcactcaccctgggctacatggct
gaggcctttggagtcagtacagagttcattgaccaggaactctcccgattcatagctgct
ggtcgcctccattgcaaaatcgacaaagtaaacgagattgtggaaaccaacagacctgat
agcaagaactggcagtaccaggagacaatcaagaaaggggatctactgctcaaccgcgtc
cagaagctgtcccgagttattaacatgtaa
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