KEGG   Coregonus clupeaformis (lake whitefish): 123492080
Entry
123492080         CDS       T08357                                 
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123492080 (thoc7)
  09122 Translation
   03013 Nucleocytoplasmic transport
    123492080 (thoc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    123492080 (thoc7)
   03041 Spliceosome [BR:cclu03041]
    123492080 (thoc7)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123492080 (thoc7)
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123492080 (thoc7)
SSDB
Motif
Pfam: THOC7 OVT1 Terpene_synth_C OSTMP1 Sec8_N DASH_Dad2 Peptidase_S10 COG6_N V_ATPase_I Tsi6
Other DBs
NCBI-GeneID: 123492080
NCBI-ProteinID: XP_045079961
LinkDB
Position
12
AA seq 202 aa
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSTGSPQEGFTQYQRMLGTLAQ
CEFSMGKTLLVYDMNLREMENYEKIYTDIERNITSAHDKISECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLSTIQELQQ
TLENDEKSENDDTQESSMENGE
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggtgctgtaactgatgacgaagttattcgaaaacgtcttctcattgatggagacggg
gctggagacgaccgacgtatcaatgttcttttgaagagctttactaaatggtgcaattca
actgggtcgcctcaagaaggattcacacagtaccagaggatgttgggtacattggcacaa
tgtgaattctcaatggggaagaccttgctggtgtatgacatgaacctccgggaaatggaa
aactatgagaaaatatacaccgacatagaacgaaacatcacatcagcacatgataaaata
tcagaatgcaaaaaggagatccagagggcaaagagaatacgaaagaatcgtcaagagtat
gatgcactggcaaaggtcatccagcaacatccagatcgccatgaaacactaaagcagttg
gaggcgcttgacaaagagctccagcagttgtctcacatcaaagagaatgtggaagataag
ctggagttgaggaagaaacagttccatgtgctcctcagtaccatccaggaactacagcag
acactggagaatgatgagaagtcagagaatgatgacactcaggaaagctccatggagaat
ggagaatga

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