Coregonus clupeaformis (lake whitefish): 123492096
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Entry
123492096 CDS
T08357
Name
(RefSeq) growth/differentiation factor 5-like
KO
K04664
growth differentiation factor 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
123492096
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123492096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
123492096
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
123492096
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GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
123492096
NCBI-ProteinID:
XP_045080018
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Position
12:complement(55705162..55708903)
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AA seq
538 aa
AA seq
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MKVLKRVPLLLGCWTLLYLDFIPASMRHTGTAECAAESGGKEHTGGAGEGANPGIGSAAR
LTVGKYGAGGWKSLSAARITRIRTGPPLIKGEAAKAKAVTSVSSPHGVTASHARGAVNLG
PKEAARYWVPGGDATKAAAAPAPVALSMQTGKSSASPGQSKENTVPRAGTSARTGQQKVV
DVQKHIARLAQRSAKETGKLRGRHSPKLLLVTPHDYMLSLYWSLSTGEVNTSVLHEAGMA
NTITSVVDKGQDALLPQLRRQKYYFNISSLEKEGLLGAELRILRKRLADPHKALSTGRVF
CLKLFTCVAGKQKATLLQTRTIEDHNTPKWEVFDIWKLFKNFKNTVQLCFELEGLERGRP
VDLRALGFSRLGRQTKEKAFFLMFGRTTKNDLFYNEIKARSGHDNKTVYEYLFTQRRMRR
APTTRSKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactgaaacgtgtccctcttttattggggtgttggactctcttatacctggac
tttatcccagcgtcaatgcgccataccgggacggcagagtgcgcagccgagagcggaggc
aaggagcacacaggcggagcaggtgaaggagccaacccgggaattggctcagctgccagg
ttgacggtaggaaagtacggagcagggggatggaagtctctaagtgctgcgaggatcacg
cgcattagaacaggacccccgctgataaagggcgaggcagccaaagcgaaagctgtgaca
tcagtgtcatcaccgcacggcgtaacggccagccatgctcgtggagctgtcaatttgggg
cccaaggaggctgcgcgctattgggtacccggcggggatgctactaaagcagcagctgcg
cctgctcccgtggcattgagcatgcaaacaggaaaaagctcagccagtcctggacagagc
aaagaaaacactgtccccagagctggaacatcagcacgaactggacagcaaaaagttgtt
gatgtgcaaaagcacattgctcggttggcccaaaggagtgccaaagaaacgggcaaactc
agaggcagacactctccaaagctcctattggtgacgccacatgactacatgttgtcactg
tattggtcactatccacaggagaggtgaacactagtgtgctacacgaggctggcatggcc
aacaccatcaccagcgttgtggataaaggacaagatgcccttcttccccagctgagaaga
cagaagtattacttcaacatcagttccctggagaaggaggggttactgggtgccgagctg
cgtatactcaggaaaagactggctgatccacacaaagcactttccactggtagagttttc
tgcctgaagcttttcacctgtgtagcaggtaagcagaaagctacactgcttcaaactcga
accatcgaggaccacaatacgcccaaatgggaagtgtttgacatttggaaactatttaag
aatttcaagaacaccgtccagctttgcttcgagctggagggtttggaacggggccgcccc
gtggacctcagggcactgggcttcagtcgcctgggcaggcagaccaaagagaaggccttt
ttcctcatgttcgggcgcaccacgaaaaacgacttgttctacaatgagatcaaagcccgg
tcgggccacgacaacaagactgtgtacgagtatctgttcactcagcggcgcatgcgccga
gctccaaccacccgcagcaagaagctggccaagaaccccaagcctcgttgccacaggaag
cagctgcacgtcaacttcaaggagatgggctgggacgattggatcatcgccccattagag
tatgaggcctaccactgcgacggggtgtgcgacttccctattcgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggaccccgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccaatcagcatcctctacattgactcagccaat
aatgtggtctacaaacaatacgaggacatggtggtggagtcctgtggctgcaggtag
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