Coregonus clupeaformis (lake whitefish): 123492144
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Entry
123492144 CDS
T08357
Name
(RefSeq) alpha-tectorin-like isoform X1
KO
K18273
alpha-tectorin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
123492144
04147 Exosome [BR:
cclu04147
]
123492144
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
123492144
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123492144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
C8
NIDO
Zona_pellucida
TIL
TILa
LRR_4
LRR_9
FXa_inhibition
LRR_8
LRR_NXF1-5
LRR_At5g56370
DUF7055
Motif
Other DBs
NCBI-GeneID:
123492144
NCBI-ProteinID:
XP_045080076
LinkDB
All DBs
Position
13:3861787..3950246
Genome browser
AA seq
2484 aa
AA seq
DB search
METSDEEEGRTFVQVVSEKYNPENFPYCRGNGMGVVVLSSPQGSPIKDRLNLPSVLVLDG
CGISKAGDKAEVATFCAHVVELDLSHNQLQDWGEICTIVSNIPNLDFLNLSMNPLSGIEL
EPGLAEVFSRVRRLVLINTRVTWDTVHTLTRQTPELEELFLCLNDYDQVAESPVPCPSLR
LLQITDNQLQEWSEVRKFGPMYPSLDTLVLSNNRLSSVEEDTPRDSLQRLFPNLRSINLN
NSGLNRWEDIERLNFFPKLEEARLMGIPLLQPYTNKERRSLTVAQLPSVTMLNGSVVTEG
EREDAERFFIRHYLDCSEETLPQRKYSYLLNYSTFLYIWPSFIWAAISEAALSQEIMYPY
GPVHRDLETPKMDDGSSTEIIILMPFIFFNNPYRSIYVNNNGVISFNVQVSQFTPEAFPL
SDSRSFIAPLWADVHNGIRGDVYYRESTDPEILQRASQDIRKYFKNMPTFTATWVFITTW
HQVTFYGGSQTTPVNTFQAVLISDGLSCFSMFNYGEINWSTGTASGGDPLTGLGGTTAQS
GFNGGDNGHFLNLPGSRSNEVVEIEQTTNVNLPGRWVFRIDTALIDPANGCSYNGRFYRR
GEIFWLSDQCSQRCRCLDMDNEVLCQDAPCGQLETCEQQEGAFYCQPTRTSTCVVFGDPH
YHTFDGFLYHFQGTCSYLLARPCWEVAGLPFFSVEAKNENRGVASVSWLRDVTVEMYGHR
VTLPKGSQGTVQVDGLVKTLPVQLQLGAVRVYQSGVAVALETDFGLLVTYDGQHYASISL
PSSYFNNTCGLCGNYNDDPADDPVLPDGSLAESVVELGGSWRAEDADWRCTDGCAQNCSV
CDPLTEAFYFRPDYCGLINKTDGPFRDCRAVVDPTAFVYSCVYDMCSNRDNITTLCQAIQ
AYALACQALGVTIRPWRSRTFCGGSLTCPESSHYQVCTSACPASCSDLTSHLYCAHPCTE
GCQCDPGYVLSGSRCVRHQDCGCERDGLYYPLNYTFWAGPTGEGRECTLRCVCGPNGEVS
CFNDSCREGEVCVAEVGLLGCYPRREGVCSLGQNVVTASFDGASMLFPDDSSYYLLRSCG
PTPANVSAVEVKMGRRLVNKGPAWMRPVVVRVANLEAQMGGSDFDTVKLNGEPVLLPYIH
PLETLMIYRAPGNATVVESSGLVLVRYTRQGFLNISLSTLFYNATCGLCGLFNGNASDDL
RLPNGRLAESPELFTEGWRAIADDLTCNGDCDDLYRMCTDLRLYQSPWMCGNINDPGNSS
FLACHSAVNPSPFFRNCLYNMCVREGNRSALCSSLQAYASACQDAQVGLAAWRSATNCPL
PCPENSHFDECTSACQLTCAGLDEPDEPCPLPCQEGCQCEEGFALRDGQCVARSDCGCLD
LGSRQLVTNQTFWTDWECKERCYCNGSDNSVYCTLAPCREGEYCQEGLEGLYFCQPRTEA
LCVAAGYSHFLPFGGVPFELQSSCTLRLATTSGTSSSATFPRFKLSARNEERDTGQAIWV
RGFVLEVYGYEIEVSRSYKHTITVNKERLYLPLKLGPGKVHIFTFGMQLVVETDFGLKVA
FDWNTLLLLTLPRRLYNATCGLCQGIPLSSPPTLTTSDWGMAWADRDTFCQVGCGDSCPR
CGLVERGLGAAVRLCGLIVDRGGVFARCHSKVAPAFFYQSCLQDTCLDQGAPETICNWLQ
IYTSTCQTQGVRVLGWRSDTPCVLTCPANSHYSGCMSVCQPQCAPARGQRECTQDCVEGC
QCDQGYVLNGKGCILPQNCGCYTDGKYYEPKQLFWNGDCTKRCQCIGRNLIQCDPRRCKA
EEECALHHGVRGCFARRSQHCVASGGGVFRTFDGASLRLPASCSFVLSTNCHKLPDLSFQ
LIANFDKWSTPNLTTISHAYLYINEENILISGSTVKVNGTPVSVPFVTGLMTRVSTSEGF
LVIDTPQDIQVRYNRFNTLSITMGQRLQNKVCGLCGNFNGDPTDDYITSRGKPAVSALEL
AQSWKTNGMQNSCDETQYVALAQSCENTAVLGLQGEEGCQKLTQMKGFFQPCHGLLDPRP
FYQSCYLDGCYNHRKAQVCGSLAAYAEACRSLGTLTTKWIAQENCSEWIYDPCAGEICTN
NTCEQENGGDLCGCPELPNNAGDEDDIIQAEVTCKHAQMEVSISKCKLFQLGFEREDVRI
NDQHCPGIEGEDFISFHINNTKGHCGSIVQSNSTHIMYKNTVWIESVNNTGNIITRDKTI
NVEFSCAYELDLKISLETVLKPMLSVINLTLPTQEGNFITKMALYKNSSYHQPYREGEVV
LSTRDILFVGVFVEGADENQLILIVNMCWATPSRYSSDRLRYIIIERGCPNIKDNTIGMA
ENGVSLTCRFHVTVFKFIGDYDEVHLHCDVSLCDHEINACKVNCPHNRRMYSDYSDHKEQ
ILTVGPIRRRESDWCEVGNGGCEQICTSKGMGTVCSCVTGMLQRDGKSCRAVSSSVDLRP
LVLPLALSTVVSVLLAHSHTSLFS
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgatgaagaggaggggcgcaccttcgtccaggtggtcagtgagaagtat
aacccagagaatttcccatactgtcgtgggaatggcatgggtgtcgtggtactgtctagt
ccacaggggtcgcccatcaaagatcgtctgaacctgcccagtgtgctggtcctggatggc
tgtggcatcagtaaagctggggacaaggctgaggtggccaccttctgtgcccatgtggtg
gagctggacttgtcccacaaccagctgcaagactggggggagatctgcacgattgtgtct
aacatccccaacctggactttcttaacctgagtatgaaccctctgagtgggattgaactg
gagccaggcctggctgaggtgttctcccgagtccgccgcctggtcctcatcaacacgcgt
gtcacgtgggacacggtacacacactcacacgccagaccccagaattggaggagctcttc
ctttgtctgaacgattatgaccaggttgccgagtccccggtcccctgcccctccttgcgc
ctgctccagatcacagacaaccagctacaggagtggagtgaggtgcgtaagtttgggccg
atgtacccgtccctggacaccttggtgttgtccaacaacagactcagctctgtggaggag
gacacacctcgggactcactgcagcgcctgtttcctaacctgcgcagcatcaacctcaac
aactcagggcttaaccgatgggaggacatagagaggctgaatttcttccctaaactggag
gaggcgaggctgatggggattcccttactgcagccctataccaacaaagagagacgcagc
ctcaccgtggcacagttgccatctgtgactatgttgaatgggagtgtggtgacggaaggg
gaaagggaagacgctgagaggttcttcatcagacattacctggactgttctgaagagacg
ctgcctcagagaaagtattcatacctcttgaattattccacatttttgtatatttggcct
tcatttatttgggctgcaatttctgaggctgctctttctcaagagatcatgtacccctat
gggcccgtccaccgagatctggagacacccaagatggatgatggaagttccactgaaata
attatactcatgccattcattttctttaataacccctaccgctccatctatgtcaacaac
aacggtgtgatctccttcaacgtgcaggtgagccagttcaccccagaggccttccccctg
agtgacagcagatccttcatcgccccactatgggcagacgtgcacaatggtatccgcgga
gacgtgtactatcgcgagagcacagacccagagatactgcagcgggcctcacaagacatc
cgcaagtacttcaagaacatgcccaccttcacagcaacctgggtcttcatcacaacctgg
caccaggtcaccttctacggaggcagtcagaccaccccggtgaacacgtttcaggctgta
ttgatatcagatggtctgtcatgcttttccatgttcaactatggagagatcaactggagc
acaggcactgccagtggaggagaccctctgactggtttaggtggaaccacagcacagtca
ggttttaatggaggagacaacggtcacttcctcaacctgcctgggtcccgctccaatgag
gtggttgaaatcgagcagacgaccaatgttaacctgcctggccgctgggtcttccgtata
gacactgccctaatagaccctgccaatggctgcagttacaatgggcggttctatcgacgc
ggcgagatcttctggctgtctgaccagtgctcccagcggtgccgctgcctggacatggac
aacgaggtgctctgccaggacgcgccgtgcggccagctggaaacgtgcgagcagcaggag
ggtgccttctactgccagcccacgcgaaccagcacctgcgtggttttcggtgacccacac
taccacacctttgacggcttcctctaccacttccagggcacctgctcctatctgctggcc
cggccctgctgggaggtggctggcctgcccttcttcagtgtggaggcaaagaacgagaac
cgtggcgtggcctccgtgtcctggctgagggacgtcaccgtggaaatgtatggccaccgc
gtcaccctgcctaagggcagccagggcactgtacaggtggatgggctggtgaagacactg
ccagtccaactccagctgggtgcggtcagagtgtaccagtcaggtgttgccgtcgccctg
gagaccgacttcggcctcctggtgacttacgacgggcagcactatgcctctatctccctg
cccagctcctacttcaacaacacatgcggcctgtgtggtaactataacgacgaccctgct
gacgaccccgtgctgcccgacggctcgctggccgagagcgtggtggagctaggtggcagc
tggcgggcggaggacgctgactggcgctgcacggatggctgcgcccagaactgcagtgtc
tgtgacccgttgaccgaggcgttttacttccgcccggattactgtggactcatcaacaag
acagacgggcctttcagggactgcagggcagtggtggaccccacggccttcgtctatagt
tgtgtctacgacatgtgtagcaacagggacaacattaccaccctctgtcaggccatccag
gcctatgccttagcctgccaagccctgggggtcaccatacgaccctggaggtcacgcacc
ttctgtggtgggtccctgacatgccctgagtccagccactaccaggtgtgcaccagtgcc
tgcccggcctcctgctcagacctcacctctcacctgtactgtgcccacccctgcaccgag
ggctgccagtgcgacccgggctacgtgctgagtggcagccgctgtgtccggcaccaggac
tgcggctgcgagcgtgacggcctatactacccgctcaactacactttctgggcgggcccc
acaggcgagggcagagagtgcaccctgcgctgtgtttgtgggcccaacggcgaagtctcc
tgcttcaatgactcgtgtagagaaggcgaggtgtgtgtggcggaggtcggcctgttgggc
tgttacccccgcagggagggggtgtgttctctgggccagaacgttgtgacggcctccttc
gacggggcctccatgctcttcccggacgacagctcctactacctgctgaggtcgtgcggc
ccgacgccagccaatgtgtcggctgtggaggtgaagatgggccggcggttggtgaacaag
ggtccggcctggatgcggccagtggtggtcagggtggccaacctggaggcccagatgggt
ggatcggactttgacacagtgaagctgaacggtgagccggttctactaccttatatccac
cctctggagaccctgatgatctaccgcgccccgggcaacgctaccgtggtggagtccagc
ggattggtcctagtccgctacacccgccagggcttcctcaacatctccctctctaccctc
ttttacaacgccacctgtggcctgtgcggcctcttcaacggaaacgccagcgacgacctc
cgtctgcccaacggccgtctggccgaatcccccgaactctttaccgaaggctggcgggcc
atcgccgacgacctgacgtgtaacggcgattgcgacgacctgtaccgcatgtgcacggac
ctgcggctctaccagagcccttggatgtgcggcaacatcaacgacccggggaacagctcc
ttcctggcatgccacagcgccgtcaacccctcgccgttcttccggaactgcctgtacaac
atgtgcgtgcgggagggaaaccgctcagcactctgctcttcgctgcaggcgtatgcctcg
gcctgtcaggacgcccaggtgggccttgccgcctggaggagtgccaccaattgccccttg
ccctgtccagaaaacagtcacttcgatgagtgcactagcgcgtgccagctgacctgcgcc
ggccttgacgagcctgacgagccgtgcccactgccttgccaggagggttgccagtgcgag
gagggctttgcgctgcgcgatggccagtgcgtggcgcgcagtgactgcggctgcctcgac
cttggcagccggcagctggtcaccaaccagaccttctggaccgactgggagtgcaaagag
cgctgctactgcaacggctcggacaacagtgtctactgcacgctggcaccatgccgggag
ggcgagtactgccaggagggccttgagggcctctacttctgccagccgcgcaccgaggcg
ctatgcgtcgctgccggttacagccacttcctgccgttcggtggtgtgcccttcgagcta
cagagcagctgtaccttgaggctggctacgacgtccgggacgagcagcagcgccaccttc
cctcgcttcaagctgtcagcccggaacgaggagagggacactgggcaggccatctgggtg
agagggttcgtcttggaggtctacggctatgagattgaggtgtctcggagctacaaacac
accatcacggtgaataaggagcgtctgtacctgcctctgaagctggggccaggaaaggtc
cacatcttcaccttcggcatgcagctggtggtggagacggactttggcctgaaggtggcc
ttcgactggaacaccctgctcctgctcacgctgcccagacgcctctacaacgccacctgc
ggcctgtgccagggcattccactctcctctccacccaccctcaccaccagcgactggggc
atggcctgggctgatcgggacaccttctgccaggtgggctgcggcgactcgtgcccgcgt
tgcggattggtcgagagaggcctcggcgccgctgtacgtctgtgcgggttgatcgtggac
cgtggtggtgtgtttgcgcgctgtcacagcaaggtggcgccagcgttcttctaccagagc
tgcctgcaggacacgtgcctggaccagggcgccccggagaccatttgcaactggctgcag
atctacaccagcacatgccagacccagggggtgcgcgtgttaggctggaggagtgacacg
ccctgtgtgctgacgtgcccagccaacagccactactctggctgcatgtccgtgtgccag
ccgcagtgtgccccagcccgcggccagagggagtgcacccaggactgtgtggagggctgt
cagtgtgaccagggatacgtcctcaacggcaagggctgcatcctgccccagaactgtggc
tgctacacggatggcaagtactatgagcccaaacagctgttctggaatggcgactgcacc
aagcgctgccagtgcatcggccgcaacctcatccagtgcgacccgcgccgctgcaaggcc
gaggaggagtgcgccctgcaccacggcgtgcgcggctgctttgcccggcgctcgcagcac
tgcgtggcatctggcggcggcgtcttcaggacctttgacggggcgtccctgcgtctgcct
gcctcctgctccttcgtactgtccaccaactgccacaagctacccgacctctccttccag
ctcatcgccaacttcgacaagtggagcacgcccaacctcaccaccatctcccacgcatac
ctctatatcaacgaggagaatatactgatctccgggagcaccgtgaaggtgaacggcacg
cccgtgtcggtaccattcgtcacaggtttaatgacgcgcgtctccacgtcggagggcttc
ctggtcatcgacacgccacaggacatccaggtgcgctacaaccgcttcaacacgctcagt
atcaccatgggccagcggctgcaaaacaaggtgtgtggcctttgcggcaacttcaacgga
gaccccactgacgactatatcacctcccgcgggaagccggccgtcagcgccctggagctg
gcccagagctggaagaccaatggcatgcagaatagctgtgacgagacccagtacgtggcg
ctggcccagtcgtgcgagaacacggccgtgctgggcctccagggcgaggaggggtgccag
aagctcacccagatgaagggcttcttccagccctgccacggcctgctggaccccaggccc
ttctaccagtcctgctacctggacggctgctacaaccaccgcaaggcccaggtgtgcggc
tcactggctgcctacgccgaggcctgccgctccctgggcacgctcaccacaaaatggatc
gcccaggagaactgctcagaatggatctacgacccctgcgcaggagagatctgcaccaac
aacacgtgtgagcaggaaaacgggggagacctgtgtggctgccccgagctgcccaacaac
gctggggatgaggatgacatcatccaggcagaggtgacgtgtaagcacgcccagatggag
gtgtccatctccaagtgtaagctcttccagctgggctttgagcgtgaggacgtgaggatc
aacgaccagcactgccccggcattgagggagaggacttcatctcctttcacatcaacaac
actaagggtcattgcggctccatcgtacagtccaacagcacacacatcatgtacaagaat
acagtgtggattgaaagcgtgaacaacactggcaacatcatcaccagggacaagacaatc
aacgtggagttttcctgcgcctacgagctagacctcaaaatatccctggagaccgtgctc
aagcccatgctcagtgtgatcaacctcaccctccccacccaggagggcaacttcatcact
aagatggcgctgtacaagaactcgtcgtaccaccagccataccgcgagggcgaggtggtg
ctgagcacgcgggacatcctcttcgtgggggtgtttgtggagggggccgacgagaaccag
ctcatcctcattgtcaatatgtgctgggccacgccgtcccgctacagcagcgaccggctc
cgctacatcatcatagagagaggttgtcccaacatcaaggacaacaccatcggcatggct
gagaacggggtgtccctcacctgccgcttccacgtcaccgtcttcaagttcatcggggac
tacgacgaggtccacctccactgtgacgtgtcgctgtgtgaccacgagatcaatgcctgc
aaagtgaactgtcctcacaacaggaggatgtactcagactacagcgatcataaggagcag
atcctcactgtaggacccatcagaaggagagagtcggactggtgtgaggtgggtaacgga
ggctgtgagcagatctgcaccagtaaagggatgggaactgtgtgtagctgtgtgactggg
atgctgcagagggacggcaagagctgtagagctgtcagctccagcgttgacctacgaccc
ctcgttctccctctggcccttagcaccgtggtctccgtgctccttgctcactcacacact
tctctcttctcctaa
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integrated database retrieval system