Coregonus clupeaformis (lake whitefish): 123492158
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Entry
123492158 CDS
T08357
Name
(RefSeq) homeobox protein otx5-like isoform X1
KO
K18490
homeobox protein OTX2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
123492158
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
123492158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
123492158
NCBI-ProteinID:
XP_045080117
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Position
13:complement(5242640..5246391)
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AA seq
307 aa
AA seq
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MMSYIKQPHYAMNGLNMTGMDLLHTTAGYPFSVSLDFSATPRKQRRERTTFTRTQLDILE
ALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKAS
PAKDQPSAGPDPSANNPSGSYSPSPTPSGPSLPPSGNNPGNAAGSIWSPAISPLPDPLAS
SAPCMQRPSAYPMSYGQPQAYAQGYAQGYAGTSSYFTGLDCGAYLSPMHSQLSASGALSP
ITVPSMGGSLSQSPASLSSQGYGMAASLGFTSVDCLDYKDQQAWKLGFSTMDCLDHKDQN
SWKFQVL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattacgccatgaacgggttaaacatgactgggatg
gacctgctacacaccacggctggatacccattctctgtgtctctggatttctcagccacc
ccgcgaaagcagcgtcgcgagcgcaccaccttcacacgcactcagctggatatcctggag
gccttgttctccaagacccgctaccccgacatcttcatgagggaggaggtggcactcaag
atcaacctccccgagtcacgcgtacaggtgtggttcaaaaaccgccgtgccaagtgccgc
caacagcagcagcagagcagcggccagtccaagccccgcccgcccaagaagaaggcgtcg
cctgccaaggaccagcccagcgctggcccagacccctcggccaacaacccctctggttcc
tacagcccctcccccaccccatcgggcccctccctgccgcccagcggcaacaaccctggc
aacgcagccggctccatctggagcccggccatctcaccactccctgaccctctggcctcc
tcggcgccctgcatgcagcggccctctgcctacccgatgagctacggccagccgcaggcc
tacgcccaaggctacgcccagggctacgccggcacctcctcctacttcacgggcctggac
tgcggcgcctacctgtcgcccatgcactcgcagctgtcggctagcggtgccctcagcccc
atcaccgtgccctcaatggggggctcgctgagccagtcacccgcatcgctctcctcccag
ggctacggcatggccgcctcgctgggcttcacctccgtcgactgcctggactacaaagac
cagcaggcctggaagctgggcttcagcaccatggactgcctggaccacaaagaccagaat
tcctggaagttccaggtgctgtag
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integrated database retrieval system
