Coregonus clupeaformis (lake whitefish): 123492245
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Entry
123492245 CDS
T08357
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03020
RNA polymerase
cclu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123492245
09124 Replication and repair
03420 Nucleotide excision repair
123492245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
123492245
03400 DNA repair and recombination proteins [BR:
cclu03400
]
123492245
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123492245
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123492245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123492245
NCBI-ProteinID:
XP_045080551
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All DBs
Position
13:17614738..17633427
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AA seq
142 aa
AA seq
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MCPLRPQVVQETVPPPVTLRAAPPSSIGVDSEVLGDGTDGPQSERPRVANRITIIKDTKV
PNACLFTLNKEDHTFGNIIRQQLLKDPQVLFAGYKVPRSLEHKIVIRVQTTPDYSPQEAF
TNAITDLISELSLLEERFRVST
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtgccctctgcggccacaggtggtgcaggaaacggtcccccctccggtcacccttaga
gcagcacctccgagctccataggtgtagactcagaggtgctgggggatggaacggacgga
ccccaatccgagcgtccgcgggtggccaacagaatcacaatcatcaaggacacaaaagtc
cctaacgcctgcctcttcacgttgaacaaagaggatcacacatttggtaacatcatcaga
caacaacttctgaaggacccccaggtgctctttgctggctataaggtccctcgttctctg
gagcacaagattgtgatccgtgttcagaccacaccagactacagtcctcaggaggctttc
actaatgccattactgacctcatcagtgagctgtcgttgttggaggagagatttagggtg
agtacatga
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