Coregonus clupeaformis (lake whitefish): 123492367
Help
Entry
123492367 CDS
T08357
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
123492367
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
123492367
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
123492367
Peptidases and inhibitors [BR:
cclu01002
]
Serine peptidases
Family S54: Rhomboid family
123492367
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
123492367
Mitophagy factors
Parkin-dependent mechanism factors
123492367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Caps_synth_CapC
UNC119_bdg
Motif
Other DBs
NCBI-GeneID:
123492367
NCBI-ProteinID:
XP_045080812
LinkDB
All DBs
Position
14:complement(5437928..5445334)
Genome browser
AA seq
257 aa
AA seq
DB search
MFTIGFTGCSFGAAAILQYESLKSRVQTARDEAEVEKNGKASQDMTHWHNWWNQLTDFQK
QVILLMSFVDDFWNSLTEGQQMATGIIAVNAVVLCCWRIPSMQRSMLKYFTANPASKTRC
LPMLLSTFSHYSIIHMAANMYVLWTFSSSIVSLLGKEQFLAVYLSAGVISTMVSYVCKTA
TGRLHPSLGASGAIMTVLAAVCTKMPEAKLGIILLPMVSFTAGNALKAIVAMDAAGLIMG
WRLFDHAAHLGRALFGV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaatagggtttacagggtgctcctttggtgcggcggccatcttgcaatacgag
tctttgaagtcacgagtgcagacggccagggacgaggctgaggtggagaaaaacggaaag
gcatcacaagacatgacacactggcacaactggtggaaccagctaacagacttccagaaa
caggtcatcctgctcatgtcgtttgtggatgatttctggaacagcctgaccgagggtcag
cagatggccactgggatcatagcggtcaatgctgtggtgctctgctgttggcgaataccc
tctatgcaacgatccatgctcaagtactttactgccaacccagcctccaagacgcggtgc
cttcccatgctcctctccaccttcagccattactctataatccacatggcagccaacatg
tatgtcctgtggaccttctcctccagcatcgtctctctcctggggaaggagcagttcctc
gctgtctacctctctgctggcgtgatctccactatggtgagctacgtgtgtaagaccgcc
acgggacgcctgcatccctcgcttggggcgtcaggggccatcatgacggtcctggcggcg
gtctgcaccaaaatgccagaggccaaactgggcatcatcctcctgcccatggtcagcttc
actgcaggcaacgccttgaaagctatcgttgccatggatgcagcggggctcattatggga
tggaggctgtttgatcatgcggctcaccttggaagagcactcttcggagtgtga
DBGET
integrated database retrieval system
