Coregonus clupeaformis (lake whitefish): 123492628
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Entry
123492628 CDS
T08357
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123492628
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
123492628
03037 Cilium and associated proteins [BR:
cclu03037
]
123492628
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
123492628
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
123492628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
123492628
NCBI-ProteinID:
XP_045081291
LinkDB
All DBs
Position
15:23099269..23114005
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AA seq
705 aa
AA seq
DB search
MATISQSGEESLSTLVSDISVLEQRNSTIATIAMVLDVNTGISTSKEMLKLSIIDMIFTV
ASILLIDFIRGLVVRYLSDCCCWDLKPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPA
FNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYR
PSQHCGPFSGQEKIYDIISETIANDFPLWFSKVMSYVTSPVVALPALLLLFMLIYYLQAI
ARSLKFTNNQLRMQLQTERTEDKKKVFQLASARLQATEVPGGDRKPDQQDSDITSRESSI
RTPSPRRNGSVTNFQSPDRHGNGIRTITQSASRAEIARATAAAGASRSPTVSILHKQRPE
HIPNRHPAYLGGPSGTCRSKSYHHVAYNPPTRYSSENIHSDPLFRKTIRPMHPTEAAGIV
TAQSYVGRRPHTTRYVIVNEHEARKKLLRSATRVPRHFRAEDPVGEIVELIPRNIKRYTP
RAPHLHGHPHRSNPPQSHLSEEEEEEEGGGKRESRRGLFGQTHRPRSLSDLHQPARFYIG
ERLESKLSMAPKDSHTARGRYGGEAQEGDWEDMETRLHSLSQTSIRGAELPPPVRHTQSP
ARHSHSPGRLAHSSPQGPGRRLELQVKPKTSRSKMEPSLTESDSASLASSSDQQNSSTDQ
YIQVIHNKEKYLKSEARQGKLAKKKSKASIDTNVSGSKELVFSNV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatctcccagtcgggggaggagagcctctccaccctcgtatcggacatctcc
gtcttggaacaacgcaacagcaccatagcgaccatcgccatggtgctggacgtcaacaca
ggcatcagcaccagcaaggagatgttgaagctgtctatcatcgatatgatcttcacggtt
gccagtatcctgttgatagacttcatcagagggctggtggtcaggtacctgagtgactgc
tgctgctgggacctgaaacctgagtatggggaattcaagatagctgagaatgtactccac
ctgatatataaccaaggaatgatctggatgggtgcattcttctctccctgtctgcctgcc
tttaacgtgttgaagctgataggcttgatgtacctgaggagttgggctgtgctcacctgc
aacgtccctcaccaacaggtgttcagagcatccagatcaaataatttctacctggctatg
ctgttgttcatgctgtttctatgtatgctgcccaccatctttgccattgtgagatacaga
ccttcccaacactgcgggccatttagcggtcaggagaagatttatgacataatctcggag
acgatagccaatgacttcccgctgtggttcagtaaagtgatgagttatgtcaccagccct
gtcgtagcgctgcccgctctgctgctgctgttcatgttgatatactaccttcaggccatc
gccagatccctcaaattcaccaacaaccagctgaggatgcagcttcagactgagagaaca
gaagacaagaagaaggtattccagctggcttcagcgaggctacaggccacggaggtccct
ggcggggacaggaagcctgaccagcaggacagtgacatcaccagccgcgagtcgtccatt
cgcacgccgtcgccccgacgcaacggcagcgtcacaaacttccagtcgcctgatcgacac
ggcaacggcatccgcaccatcacccagtcggcatcgagggccgagatcgctagggcgacg
gctgctgctggggcgtctagaagtccaacagtgtccatactgcacaagcaaaggccggag
cacatccctaacagacaccctgcctacctgggaggccctagcggtacctgcaggtccaag
tcctaccaccatgtggcctacaaccccccgacacgctactcctcagagaacatccactcc
gaccccctcttcaggaagaccatcaggcccatgcaccccacagaggcagctgggatagtg
accgcccagagctacgtgggccgtcgcccccacaccacgcgctacgtcatcgtcaacgag
cacgaagctaggaaaaagctgcttcgatccgccacgcgcgtccctcgccacttccgagcg
gaggacccggtgggtgagatcgtggagctgatcccgcggaatatcaagcggtatactcca
agggctccgcatctgcatgggcacccgcataggtcgaatccgccgcagtcgcacctgagt
gaggaagaggaggaggaagagggaggggggaagagggagtctaggagggggttgttcggg
cagacgcaccggccccgctcgctctccgacctccaccagccggcgcgcttctacatcgga
gagcgcctggagagcaagttgtctatggcaccgaaagacagccacaccgctagggggcgc
tacggcggtgaagcccaagaaggggactgggaggatatggagacgcgcttgcactccctc
tcccagaccagcatcagaggagccgagcttccaccaccagtcaggcacacacagtccccg
gccagacactcccactccccgggcagactcgcacactcttccccccagggccctggaaga
cgcctggagctccaggtcaagcccaagacgtccaggtcgaagatggagccttccctgact
gagtcggactcggcctctctggcctccagtagcgaccagcaaaacagcagcacagaccag
tacatccaggtcattcacaacaaggagaagtacctcaagtctgaggccaggcaaggcaag
ctggctaagaagaagtccaaagccagtatagacaccaacgtgtctgggtctaaagaactg
gtcttctccaatgtatag
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